Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe02g02161 ATGTCTTGTTTGCAAAGATCAGCCTCTCGAATCCAATCTGCTGGTCATTCCCAGAAAATAGAGGACGCAAGAGCCTACCTTAGTGCAGCTCTTACCAACAAGAACACTTGTTTGGAAGGTCTAGAGTCTGCGTCTGGTCCTTTCAAACCAATCTTAACAAATCTCTTTGTTGATACTTACAAGTATGTGAGCGATTCTCTCTCGCTACTTCCAAGATCAGGAGCTCATTCGAAAGGCCTTCATAATCGCCGTCTCATGAATGCAAAGTTCCCGGCATGGATGTCAAAGAAAGATCGCCGGATCTTGCAGGGTGATGACGAATATGACCCAAGCCAAGTGCTAACTGTTGCTGCAGACGGAACAGGAAACTTCACCACCATTACAGATGCTGTCAATTTTGCTCCAAACAATAGTAACGACAGAACAATTATCTATATAACTCAAGGGGTTTATGAAGAAAATGTGGTGATACCAAACAACAAGCCCAACATTGTTTTTCTGGGGGATGGAAGTGACGTTACCATCATTACTGGTAAAAGAAGCGTGGGAGATGGTTGGACCACTTTCAGATCTGCAACATTGGCGGTGTCTGGAGACGGATTCTTGGGTAGAGATATAACAATTATGAACACAGCTGGACCAGAGAAGCACCAAGCGGTTGCCCTGAGAGTAAATGCAGACTTGACTGCATTATATCGGTGTTCAATAAATGGTCACCAGGATTCATTGTATGTTCACTCATTTCGTCAATTCTATAGAGAGTGCAACATTTCAGGAACAATAGATTACATATTTGGAAATGCCGCAGTGGTTTTCCAGGCATGCAACATAATTTCCATAATGCCGATGCCCAACCAATTCACAGTTATCACGGCCCAATCTCGAGATACCCCCGATGAGGTGACTGGAATTTCTATCCAGAACTGCTCAGTAATTGCTTCAGATGAGCTGAATGCAAACCGTGCGACGGTCAACAGTTACCTTGGGAGGCCATGGCGGGTGCACTCACGATCCGTATACATAGGGTCCTACATTGATGAGTTCATTGAGCCAGTGGGATGGACCAAGTGGTCTGGTGATGAAGGATTGGAGACACTCTACTATGGAGAGTATGGAAACTACGGTCCTGGTTCGGGAACGGATGACAGAGTTTCGTGGGGAGGGTTCCACAAAATGGATTACTATGATGCTTATAATTTCACGGTGTCAGAGTTTATCACTGGCGATGAGTGGCTTGACTCCACTTCTTTTCCTTACGATCAGGGAATTTGA 1272 44.81 MSCLQRSASRIQSAGHSQKIEDARAYLSAALTNKNTCLEGLESASGPFKPILTNLFVDTYKYVSDSLSLLPRSGAHSKGLHNRRLMNAKFPAWMSKKDRRILQGDDEYDPSQVLTVAADGTGNFTTITDAVNFAPNNSNDRTIIYITQGVYEENVVIPNNKPNIVFLGDGSDVTIITGKRSVGDGWTTFRSATLAVSGDGFLGRDITIMNTAGPEKHQAVALRVNADLTALYRCSINGHQDSLYVHSFRQFYRECNISGTIDYIFGNAAVVFQACNIISIMPMPNQFTVITAQSRDTPDEVTGISIQNCSVIASDELNANRATVNSYLGRPWRVHSRSVYIGSYIDEFIEPVGWTKWSGDEGLETLYYGEYGNYGPGSGTDDRVSWGGFHKMDYYDAYNFTVSEFITGDEWLDSTSFPYDQGI 423
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 22894363 22896019 + Bpe009979.1 Bpe02g02161 100310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe02g02161 423 Gene3D Invertase/pectin methylesterase inhibitor family protein 1 72 IPR035513 -
Bpe02g02161 423 Pfam Pectinesterase 115 409 IPR000070 GO:0030599|GO:0042545
Bpe02g02161 423 SUPERFAMILY Pectin lyase-like 110 422 IPR011050 -
Bpe02g02161 423 Gene3D - 109 423 IPR012334 -
Bpe02g02161 423 PANTHER PECTINESTERASE 2 422 - -
Bpe02g02161 423 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 9 70 IPR035513 -
Bpe02g02161 423 ProSitePatterns Pectinesterase signature 2. 257 266 IPR033131 -
Bpe02g02161 423 PANTHER PECTINESTERASE 2 422 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe02g02161 Bpe13g01126 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g02161 Bpe-Chr2:22894363 Bpe14g00892 Bpe-Chr14:6662463 8.89E-126 dispersed
Bpe06g00535 Bpe-Chr6:16428946 Bpe02g02161 Bpe-Chr2:22894363 1.11E-129 transposed
Bpe13g01126 Bpe-Chr13:16828866 Bpe02g02161 Bpe-Chr2:22894363 2.77E-111 wgd
Bpe02g02161 Bpe-Chr2:22894363 Bpe03g00695 Bpe-Chr3:27078457 2.72E-115 wgd
Bpe02g02161 Bpe-Chr2:22894363 Bpe08g00556 Bpe-Chr8:3879095 1.08E-108 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe02g02161 - - tcc:18588201 636.336