Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe02g02165 ATGGGAAAAGAAGTCCTTAACAAGAATCAACAGCAGCAGCAGCTGCCACAGCAAACGTCGTACACGGTGGAGCAGATGGTTGCCGTGAATCCCTATAACCCCGACATCCTTTCTGATCTCGAAAACTACGTTAACGAGCAGGTTGCATCTCAATCATACAGTCTGGACGCTAATCTATGCCTTCTTCGCCTATATCAGTTTGAGCCGGAGCGAATGAGCACCCAGATAGTTGCACGCATTCTTGTTAAGGCCTTGATGGCGATGCCAGCTCCTGATTTCAGTCTTTGCCTCTTTTTGATTCCTGAAAGAGTGCAAATGGAAGAGCAGTTCAAGATTCTGATTGTCCTTTCACACTACTTGGAGACTGGACGGTTTCAACAATTCTGGTATGAAGCTGCTAAGAGCCGGAATACATTGGAAGCTGTGCCTGGTTTCGAGCAAGCCATCCAAGCCTACGCAATTCACGTACTTTCCTTGACCTATCAAAAGATCCCTAGGCCTGTACTTGCTGAGGCGATGAATATCGAGGGTCTATCTTTAGACAAATTCCTCGAGCACCAGGTGGCAAACTGTGGTTGGAATCTCGAAAAAGGTCAAAGGAAGAGCCAACTCATTATCCTACCTCGCAACGAGTACAACCATCCTGAACTGAAGAACTCTGAAGATAACATCCAATTAGAACTTGTCACCCGAATTTTCCCAATTCTCAGCTGA 714 46.22 MGKEVLNKNQQQQQLPQQTSYTVEQMVAVNPYNPDILSDLENYVNEQVASQSYSLDANLCLLRLYQFEPERMSTQIVARILVKALMAMPAPDFSLCLFLIPERVQMEEQFKILIVLSHYLETGRFQQFWYEAAKSRNTLEAVPGFEQAIQAYAIHVLSLTYQKIPRPVLAEAMNIEGLSLDKFLEHQVANCGWNLEKGQRKSQLIILPRNEYNHPELKNSEDNIQLELVTRIFPILS 237
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 22925752 22927765 - Bpe009983.1 Bpe02g02165 100314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe02g02165 237 Pfam CSN8/PSMD8/EIF3K family 73 200 IPR033464 -
Bpe02g02165 237 ProSiteProfiles PCI domain profile. 53 212 IPR000717 -
Bpe02g02165 237 SUPERFAMILY Winged helix DNA-binding domain 143 234 IPR036390 -
Bpe02g02165 237 SUPERFAMILY ARM repeat 16 140 IPR016024 -
Bpe02g02165 237 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT 11 17 236 IPR009374 GO:0003743|GO:0005737|GO:0005852
Bpe02g02165 237 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT K 17 236 - -
Bpe02g02165 237 Gene3D ARM repeat; domain 1 13 131 IPR016020 GO:0003743|GO:0005852|GO:0006446|GO:0043022
Bpe02g02165 237 Hamap Eukaryotic translation initiation factor 3 subunit K [EIF3K]. 14 237 IPR009374 GO:0003743|GO:0005737|GO:0005852
Bpe02g02165 237 Gene3D - 134 235 IPR036388 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe13g01123 Bpe-Chr13:16813437 Bpe02g02165 Bpe-Chr2:22925752 8.46E-20 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe02g02165 K15028 - tcc:18588218 382.874