Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe02g02172 ATGGCCGTTGTTCGCCTCCTCTTCCTCCTCGTCTTCTCTCTCCTCCCCCTCTCTCTCTCCCTTTCTGAAATCCAGGCCCTTCGAAAGCTCAAGCAATCCTTCAACAATTCAGCCGCCTTGAATTCTTGGGATTCTGATTCGTCTCCTTGCCATGCGACATGGACTGGCATCATTTGTAACAATGGCATCATCACCGGTCTTCACCTTTCAGATTTGGGTCTTTCCGGCGAGATCGATATTGAAGCCATTAGCGAACTTCGTGGCCTTCGAACTGTCAGTTTGGTAAACAATAGCTTCTCCGGCCAAATTCCAGGATTCAACAGAGTTGGCGCTTTGAAGGCTCTTCTGCTATCCAGCAACGGATTCTCCGGGGAAATTCAGAACGATTTCTTCTCCAACTTAACGTCGTTGAAAAAGGTCTGGTTTTCCGGCAATCAATTCTCTGGAAAAATCCCCGATTCGCTGGGGAAATTATCTCATTTAATAGAGCTACATCTCGAAAGCAACCAATTCTCCGGGGAAATTCCAAATCTGAAACAAAAATCCATAACCTCTCTGGATCTATCCAACAACAAGCTTGAAGGAGAAATCCCCAGTAGTTTCTCCGGATTCAATCCGAAATCGTTTGAACAAAACGAAGGACTCTGTGGGAAACCGCTGAACAAGACATGCAAGGTGGCGGAGACAACATTTACACAATCAGCAGTGGCCGAACCTCAGTCTGGAGAAAACTCCAACGTCAAACAAATTGTGGTAGGGGCATTGATTGCCATCGTCCTCGTTTTCTTGGCCTATCTCGCCGTCAGTTCGTCGAGACGACGGGATGACGATTTCAGCGTTCTGGGTAAAGAACAAATGAACGACGCAGTTGAAGTGCATTTGCCAACTACTCACCAGAAAGCGAAAGAGTCGACCCGGAGAGGAGACTCAAAGAGGGGGTCTCAAAGTGGCCGGAACGGGATGGGAGACCTGGTTGTGATTAATAGCGAGAAGGGTGGGTTTGGGTTGGCCGATTTGATGAAGGCTGCGGCGGAGGTGCTCGGAAACGGCGGCTTGGGCTCTGCTTACAAGGCCGTGATGTCGAATGGATTGTCTGTGGTGGTGAAGAGGATGAGGGAGGTTAACAGGATCGGAAAAGACGGGTTCGACATCGAGATGAGGCGGTTCGGAAGGCTCCGTCACCGGAATATTTTGACGCCGTTGGCTTTCCATTACCGGAGAGAGGAGAAGCTCCTGGTTTCTGAATTTATTCCCAAAGGCAGCTTGTTATACGTCTTGCATGGTGATCGCGGAGTTTGTCATTCCGATCTAAACTGGCCAACCCGATTGAAGATAATCAAAGGGATAGCACAAGGGATAGGTTTCATTCACTCGGAATATTCAACCTACGATCTCCCCCATGGCAATCTCAAATCCAGCAACGTACTTCTCAGCGAAGATTATGAACCTCTCCTAAACGACTACGCACTTCATCCCTTAATCAACCCCCCCAACGTCGCACAAGCAATGTTCGCCTACAAATCGCCGGAGTACGCGCAGTACCAAGAAATTTCCCCAAAGTCTGACGTCTACTGTCTTGGAATCATCATTCTCGAAATCCTCACCGGGAAATTCCCTTCGCAGTATCTCAGCAACGGCAAGGGCGGGACCGACGTCGTGAAGTGGACCTTATCGGCTTTGGCTGAGAAGAGGGAGGCTGAAGCGTTGGATCCGGAAATCGCCGGCGATGCAGATTCACAGTCGGTTGAGCAGATGTTGCAGCTTCTCCGCGTCGGATCTTCGTGCACGCAAAGTAGTCCACATCAACGGCCAGAAATGAGGGAAGCCATTAGAATGATAGAAGAGATACAGGTTTAG 1857 49.33 MAVVRLLFLLVFSLLPLSLSLSEIQALRKLKQSFNNSAALNSWDSDSSPCHATWTGIICNNGIITGLHLSDLGLSGEIDIEAISELRGLRTVSLVNNSFSGQIPGFNRVGALKALLLSSNGFSGEIQNDFFSNLTSLKKVWFSGNQFSGKIPDSLGKLSHLIELHLESNQFSGEIPNLKQKSITSLDLSNNKLEGEIPSSFSGFNPKSFEQNEGLCGKPLNKTCKVAETTFTQSAVAEPQSGENSNVKQIVVGALIAIVLVFLAYLAVSSSRRRDDDFSVLGKEQMNDAVEVHLPTTHQKAKESTRRGDSKRGSQSGRNGMGDLVVINSEKGGFGLADLMKAAAEVLGNGGLGSAYKAVMSNGLSVVVKRMREVNRIGKDGFDIEMRRFGRLRHRNILTPLAFHYRREEKLLVSEFIPKGSLLYVLHGDRGVCHSDLNWPTRLKIIKGIAQGIGFIHSEYSTYDLPHGNLKSSNVLLSEDYEPLLNDYALHPLINPPNVAQAMFAYKSPEYAQYQEISPKSDVYCLGIIILEILTGKFPSQYLSNGKGGTDVVKWTLSALAEKREAEALDPEIAGDADSQSVEQMLQLLRVGSSCTQSSPHQRPEMREAIRMIEEIQV 618
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 22992648 22994613 + Bpe009990.1 Bpe02g02172 100321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe02g02172 618 PANTHER LRR RECEPTOR-LIKE KINASE 5 618 - -
Bpe02g02172 618 Gene3D Ribonuclease Inhibitor 22 129 IPR032675 -
Bpe02g02172 618 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 5 618 - -
Bpe02g02172 618 SUPERFAMILY Protein kinase-like (PK-like) 345 614 IPR011009 -
Bpe02g02172 618 Pfam Protein kinase domain 345 611 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe02g02172 618 Gene3D Transferase(Phosphotransferase) domain 1 417 618 - -
Bpe02g02172 618 ProSiteProfiles Protein kinase domain profile. 341 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe02g02172 618 Pfam Leucine rich repeat N-terminal domain 22 60 IPR013210 -
Bpe02g02172 618 Pfam Leucine Rich Repeat 183 204 IPR001611 GO:0005515
Bpe02g02172 618 Gene3D Phosphorylase Kinase; domain 1 312 416 - -
Bpe02g02172 618 SUPERFAMILY L domain-like 21 205 - -
Bpe02g02172 618 CDD STKc_IRAK 347 616 - -
Bpe02g02172 618 Gene3D Ribonuclease Inhibitor 130 227 IPR032675 -
Bpe02g02172 618 MobiDBLite consensus disorder prediction 295 313 - -
Bpe02g02172 618 MobiDBLite consensus disorder prediction 293 322 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe02g02172 Bpe13g01075 CCT
Bpe02g02172 Bpe13g01075 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g02172 Bpe-Chr2:22992648 Bpe14g00541 Bpe-Chr14:4701524 2.28E-147 dispersed
Bpe02g02172 Bpe-Chr2:22992648 Bpe09g00065 Bpe-Chr9:451682 1.10E-142 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63209 PF00069 Pkinase 5.50E-26 CL0016 Bpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe02g02172 - - cmo:103498999 816.609