Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bpe02g02219 | ATGATGCTCGGTGAACCCTACCCTTCCGGCGTATCGACGTGGTTGGTGAGCGATTATGATTCGGTGACTGAAATTTTATCTCCTTTTGGAAGATCTGTCCGCTGCCACAGCAATGCGAATGGAGGAGACTACTCTCCTCAAGAAGCTTACACGGGGCTGCAGCGCTACTTGCCTTCCAATGAACGGGACAGTGATATTTCTGGTCGGGAAATGGATTCTACCGTCGACGCCTACTCCTGCGACCAGTTCCGGATGTTTGAGTTCAAGGTGAGGAGGTGCGCTAGAGGAAGGTCTCATGATTGGACTGAGTGTCCGTACGCTCATCCGGGAGAGAAGGCCCGCCGGAGAGATCCGACGAAGTATCACTACTCTGGTACTGCATGTGCGGATTTTCGAAAAGGAAGTTGCAAGAAAGGCGATTCGTGCGAGTTCTCTCATGGTGTTTTCGAGTGCTGGCTTCACCCGGCGCGTTACCGGACTCAGCCGTGCAAAGACGGAACGAGCTGCCGGCGAAGGGTTTGTTTCTTCGCTCACACGGCGGAACAACTTCGACTTTTACCTCATCAGAGTCTGAAGAGTCCAAACGCCGCTGCTTACTCGTACGACGGTTCACCTCTCCGGCATGCCATTGAGGCGTCGAGTGCAAAAAATTTAACGTTTTTGTCTTCTCCGACGAGTTCACCCCCGATGACTCCTCAGGCAGAATCTCCGCCTATGTCGCCAATGGCTCAGTCGCTTAGCCGGTCTTTCGGATTGAATTCAGTTGGAGAAATGGCGGCTTCTCTACGAAACCTCCAGATTAGCAAATTAAAGTCCCTTCCCTCTGCTTGGAATGTCCAAATAGGATCTCCGAGAGGTTCGATCCTTCGACCTGACGGGTGCAGCCTACCTGCGACGCCAACTCGAGCTTCTCCTCGTTCCGTTAATGGCGGATATGTTGATTTCTGGGACCAAACTGTGGAGGAGGAGCCAGCGATGGAGAGGGTAGAATCAGGGAGAGGACTCAGAGCTAAAATGTTTGAGAAACTGAGAAAGGAAAACTTCACTAATGAAGCCCATCCCGATTCATCGTCTGCTGCACCGGACGTGGGTTGGATTTCAGAGCTGGTGCAGTAA | 1116 | 52.24 | MMLGEPYPSGVSTWLVSDYDSVTEILSPFGRSVRCHSNANGGDYSPQEAYTGLQRYLPSNERDSDISGREMDSTVDAYSCDQFRMFEFKVRRCARGRSHDWTECPYAHPGEKARRRDPTKYHYSGTACADFRKGSCKKGDSCEFSHGVFECWLHPARYRTQPCKDGTSCRRRVCFFAHTAEQLRLLPHQSLKSPNAAAYSYDGSPLRHAIEASSAKNLTFLSSPTSSPPMTPQAESPPMSPMAQSLSRSFGLNSVGEMAASLRNLQISKLKSLPSAWNVQIGSPRGSILRPDGCSLPATPTRASPRSVNGGYVDFWDQTVEEEPAMERVESGRGLRAKMFEKLRKENFTNEAHPDSSSAAPDVGWISELVQ | 371 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 23235449 | 23236564 | - | Bpe010036.1 | Bpe02g02219 | 100368 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bpe02g02219 | 371 | PANTHER | UNKEMPT FAMILY MEMBER | 10 | 371 | IPR045234 | - | |
Bpe02g02219 | 371 | SMART | c3hfinal6 | 157 | 180 | IPR000571 | GO:0046872 | |
Bpe02g02219 | 371 | SMART | c3hfinal6 | 122 | 148 | IPR000571 | GO:0046872 | |
Bpe02g02219 | 371 | PANTHER | ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 20 | 10 | 371 | - | - | |
Bpe02g02219 | 371 | Pfam | Zinc finger C-x8-C-x5-C-x3-H type (and similar) | 127 | 147 | IPR000571 | GO:0046872 | |
Bpe02g02219 | 371 | ProSiteProfiles | Zinc finger C3H1-type profile. | 123 | 149 | IPR000571 | GO:0046872 | |
Bpe02g02219 | 371 | MobiDBLite | consensus disorder prediction | 221 | 246 | - | - | |
Bpe02g02219 | 371 | Gene3D | - | 118 | 188 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Bpe02g02219 | Bpe13g01268 | CCT | |
Bpe02g02219 | Bpe13g01268 | ECH | |
Bpe01g00577 | Bpe02g02219 | BCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bpe02g00475 | Bpe-Chr2:3085436 | Bpe02g02219 | Bpe-Chr2:23235449 | 9.42E-98 | dispersed | |
Bpe02g01775 | Bpe-Chr2:20086533 | Bpe02g02219 | Bpe-Chr2:23235449 | 3.38E-123 | dispersed | |
Bpe02g02219 | Bpe-Chr2:23235449 | Bpe04g01472 | Bpe-Chr4:21301267 | 7.23E-61 | dispersed | |
Bpe01g00577 | Bpe-Chr1:3758965 | Bpe02g02219 | Bpe-Chr2:23235449 | 1.99E-113 | wgd | |
Bpe13g01268 | Bpe-Chr13:17880145 | Bpe02g02219 | Bpe-Chr2:23235449 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
21042 | PF00642 | zf-CCCH | 2.90E-05 | CL0537 | Bpe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bpe02g02219 | - | - | qsu:112010421 | 502.671 |