Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe02g02226 ATGAAGACGAAAACTCCATTGAAGCAGCTCAAGCTCTCTGTTCCCGTCCAAGAAACGCCAATCACCTCCTTCTTGACTGCAAGTGGCACCTTTCACGATGGAGATCTATTATTAAACCAGAAAGGCCTGCGGCTTATCTCTGAAGAAAAGGAATCTCGTATGCTCTTGTACTATTATCATTTTGTAGCATGCTGCATTATTAGATTTTTTTTTTCTATGTTTCAACAGCATTCAGACAGCAAGGAGCTTGATTGTGATTTCTCACTAGAAGACCTCGAGACTATGAATGTCATCGGAAAAGGAAGTGGTGGTGTTGTACAACTTGTTCGTCATAAATGGCTAGGAAAACTATTTGCTTTAAAGGTCATCCAGATGAACATACAAGAAAATATACGAAAACAGATAGTCCAGGAGTTGAAAATAAATCAAACAGCCCAGTGTCAACAGGTGGTGGTATGCTACCACTCATTCTACCACAATGGGGCTATTTCTCTGGTCCTAGAATACATGGATCGTGGATCTTTGGCAGACGTGATTCGACAAGTTAAAACAATTCTTGAACCATATCTGGCTGTTGTATGTAAACAGGTAGTGTTACTGGGTCTTGTGTACTTGCATCATGAACGACATGTCATACATAGGGACATAAAGCCATCCAATCTGCTAGCGAACCACAAAGGGGAGGTGAAAATTACTGATTTTGGTGTTAGTGCTGTGCTAGCTAGCTCTATGGGCCAGAGAGATACTTTTGTAGGAACTTACAACTACATGGCGCCAGAGAGAATTAGTGGGAGTACCTATGACTGCAGTAGCGATATTTGGAGCTTAGGCATGGTGGTACTTGAGTGTGCTATAGGACGGTTTCCCTACACGCAATCAGAAGATCAGAAGAGTTGGCCAAGCTTTTATGAGCTTTTAACAGCAATTGTGTCAAGCCCGCCTCCCTCTGCTCCACCAGATCAGTTCTCTCCAGAATTTTGTTCATTTATATCTGCTTGCATTCAAAAGGACCCGCAAAGGAGATCATCGTCTTTGGACCTCTTGGGTCATCCTTTCATCAAAAAGTTTGAAAACAAAGACATTGATCTGGGAATTCTTGTTGGCAGCTTGGAACCACCTTTAAATTTCTCCAGGTAA 1137 42.04 MKTKTPLKQLKLSVPVQETPITSFLTASGTFHDGDLLLNQKGLRLISEEKESRMLLYYYHFVACCIIRFFFSMFQQHSDSKELDCDFSLEDLETMNVIGKGSGGVVQLVRHKWLGKLFALKVIQMNIQENIRKQIVQELKINQTAQCQQVVVCYHSFYHNGAISLVLEYMDRGSLADVIRQVKTILEPYLAVVCKQVVLLGLVYLHHERHVIHRDIKPSNLLANHKGEVKITDFGVSAVLASSMGQRDTFVGTYNYMAPERISGSTYDCSSDIWSLGMVVLECAIGRFPYTQSEDQKSWPSFYELLTAIVSSPPPSAPPDQFSPEFCSFISACIQKDPQRRSSSLDLLGHPFIKKFENKDIDLGILVGSLEPPLNFSR 378
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 23279875 23282985 + Bpe010043.2 Bpe02g02226 100375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe02g02226 378 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE 6 76 377 - -
Bpe02g02226 378 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE 6 1 53 - -
Bpe02g02226 378 Gene3D Phosphorylase Kinase; domain 1 71 171 - -
Bpe02g02226 378 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 76 377 - -
Bpe02g02226 378 ProSitePatterns Protein kinases ATP-binding region signature. 98 121 IPR017441 GO:0005524
Bpe02g02226 378 ProSiteProfiles Protein kinase domain profile. 92 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe02g02226 378 SUPERFAMILY Protein kinase-like (PK-like) 86 358 IPR011009 -
Bpe02g02226 378 CDD PKc_MAPKK_plant_like 90 358 - -
Bpe02g02226 378 Gene3D Transferase(Phosphotransferase) domain 1 173 368 - -
Bpe02g02226 378 Pfam Protein kinase domain 93 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe02g02226 378 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 1 53 - -
Bpe02g02226 378 SMART serkin_6 92 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g02226 Bpe-Chr2:23279875 Bpe13g01246 Bpe-Chr13:17706733 1.09E-140 dispersed
Bpe02g02226 Bpe-Chr2:23279875 Bpe01g00601 Bpe-Chr1:3948403 3.12E-148 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63210 PF00069 Pkinase 9.10E-63 CL0016 Bpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe02g02226 K04368 - zju:107432800 621.313