Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe02g02226 ATGAAGACGAAAACTCCATTGAAGCAGCTCAAGCTCTCTGTTCCCGTCCAAGAAACGCCAATCACCTCCTTCTTGACTGCAAGTGGCACCTTTCACGATGGAGATCTATTATTAAACCAGAAAGGCCTGCGGCTTATCTCTGAAGAAAAGGAATCTCGTATGCTCTTGTACTATTATCATTTTGTAGCATGCTGCATTATTAGATTTTTTTTTTCTATGTTTCAACAGCATTCAGACAGCAAGGAGCTTGATTGTGATTTCTCACTAGAAGACCTCGAGACTATGAATGTCATCGGAAAAGGAAGTGGTGGTGTTGTACAACTTGTTCGTCATAAATGGCTAGGAAAACTATTTGCTTTAAAGGTCATCCAGATGAACATACAAGAAAATATACGAAAACAGATAGTCCAGGAGTTGAAAATAAATCAAACAGCCCAGTGTCAACAGGTGGTGGTATGCTACCACTCATTCTACCACAATGGGGCTATTTCTCTGGTCCTAGAATACATGGATCGTGGATCTTTGGCAGACGTGATTCGACAAGTTAAAACAATTCTTGAACCATATCTGGCTGTTGTATGTAAACAGGTAGTGTTACTGGGTCTTGTGTACTTGCATCATGAACGACATGTCATACATAGGGACATAAAGCCATCCAATCTGCTAGCGAACCACAAAGGGGAGGTGAAAATTACTGATTTTGGTGTTAGTGCTGTGCTAGCTAGCTCTATGGGCCAGAGAGATACTTTTGTAGGAACTTACAACTACATGGCGCCAGAGAGAATTAGTGGGAGTACCTATGACTGCAGTAGCGATATTTGGAGCTTAGGCATGGTGGTACTTGAGTGTGCTATAGGACGGTTTCCCTACACGCAATCAGAAGATCAGAAGAGTTGGCCAAGCTTTTATGAGCTTTTAACAGCAATTGTGTCAAGCCCGCCTCCCTCTGCTCCACCAGATCAGTTCTCTCCAGAATTTTGTTCATTTATATCTGCTTGCATTCAAAAGGACCCGCAAAGGAGATCATCGTCTTTGGACCTCTTGGGTCATCCTTTCATCAAAAAGTTTGAAAACAAAGACATTGATCTGGGAATTCTTGTTGGCAGCTTGGAACCACCTTTAAATTTCTCCAGGTAA 1137 42.04 MKTKTPLKQLKLSVPVQETPITSFLTASGTFHDGDLLLNQKGLRLISEEKESRMLLYYYHFVACCIIRFFFSMFQQHSDSKELDCDFSLEDLETMNVIGKGSGGVVQLVRHKWLGKLFALKVIQMNIQENIRKQIVQELKINQTAQCQQVVVCYHSFYHNGAISLVLEYMDRGSLADVIRQVKTILEPYLAVVCKQVVLLGLVYLHHERHVIHRDIKPSNLLANHKGEVKITDFGVSAVLASSMGQRDTFVGTYNYMAPERISGSTYDCSSDIWSLGMVVLECAIGRFPYTQSEDQKSWPSFYELLTAIVSSPPPSAPPDQFSPEFCSFISACIQKDPQRRSSSLDLLGHPFIKKFENKDIDLGILVGSLEPPLNFSR 378
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 23279875 23282985 + Bpe010043.2 Bpe02g02226 100375

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bpe02g02226 378 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE 6 76 377 - -
Bpe02g02226 378 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE 6 1 53 - -
Bpe02g02226 378 Gene3D Phosphorylase Kinase; domain 1 71 171 - -
Bpe02g02226 378 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 76 377 - -
Bpe02g02226 378 ProSitePatterns Protein kinases ATP-binding region signature. 98 121 IPR017441 GO:0005524
Bpe02g02226 378 ProSiteProfiles Protein kinase domain profile. 92 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe02g02226 378 SUPERFAMILY Protein kinase-like (PK-like) 86 358 IPR011009 -
Bpe02g02226 378 CDD PKc_MAPKK_plant_like 90 358 - -
Bpe02g02226 378 Gene3D Transferase(Phosphotransferase) domain 1 173 368 - -
Bpe02g02226 378 Pfam Protein kinase domain 93 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe02g02226 378 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 1 53 - -
Bpe02g02226 378 SMART serkin_6 92 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe02g02226 K04368 MAP2K1, MEK1; mitogen-activated protein kinase kinase 1 [EC:2.7.12.2] - zju:107432800 621.313
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g02226 Bpe-Chr2:23279875 Bpe13g01246 Bpe-Chr13:17706733 1.09E-140 dispersed
Bpe02g02226 Bpe-Chr2:23279875 Bpe01g00601 Bpe-Chr1:3948403 3.12E-148 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi11g254 Blo01g00529 . Bda01g02038 . . Bpe02g02226 . . . . Cma05g01373 Cma12g01275 Car05g01287 Car12g01246 . . . . . . . . . . Cla11g00183 Cam11g0213 Cec11g0214 . . . . . . . . . Csa02g00082 Chy05g01408 . . . . . . . Bma01g00211 . Sed08g1406 Cmo05g01376 . . . . . Cpe11g01143 . Bhi06g01689 Tan08g0109 Cmetu04g3241 . . . . . . . . . . . Lsi11g00218 . . Cme05g02012
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Bpe01g00601 CCT 1 327 MAP Kinase Kinase Gene Family AT4G26070 68.8 1.8e-131 465.7
Bpe13g01246 CCT 3 334 MAP Kinase Kinase Gene Family AT4G26070 61.7 2.1e-119 425.6
Bpe02g02226 . 26 374 MAP Kinase Kinase Gene Family AT4G26070 52.8 1.2e-101 366.7
Bpe01g00601 CCT 1 301 MAP Kinase Kinase Gene Family AT4G29810 72.8 5.0e-129 457.6
Bpe13g01246 CCT 4 307 MAP Kinase Kinase Gene Family AT4G29810 66.1 7.4e-117 417.2
Bpe02g02226 . 10 348 MAP Kinase Kinase Gene Family AT4G29810 55.0 2.3e-102 369.0
Bpe03g00025 . 36 518 MAP Kinase Kinase Gene Family AT5G40440 77.6 1.0e-226 782.7
Bpe02g02226 . 1 378 MAP Kinase Kinase Gene Family AT5G56580 78.9 9.1e-166 579.7
Bpe01g00601 CCT 1 316 MAP Kinase Kinase Gene Family AT5G56580 61.5 6.9e-113 404.1
Bpe13g01246 CCT 6 322 MAP Kinase Kinase Gene Family AT5G56580 60.7 2.1e-109 392.5
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0007196 1 2 1 1 1 1 2 1 1 1 1 1 2 1 1 2 1 1 2 1 1 1 1 1 1 2 1 2 1 1 37
       

Regulatory proteins

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63210 PF00069 Pkinase 9.10E-63 CL0016 Bpe PK