Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe02g02241 ATGGCCGACGCGTTCAACTCACCTACTGAGCCAAGTACCACCAACTCGTTTTTCTCCCCTCGCTCTACCTCTTTTTCAGGACCCGACCCGAAGAAGAGTAAACGAACCCGAAATAGTGAAGGGAAACACCCGGTTTACCGAGGGGTCCGCATGCGGGCTTGGGGAAAGTGGGTATCCGAAATCCGAGAACCCAGAAAGAAGAGCCGGATTTGGCTCGGAAGTTTCTCGACGCCGGAAATGGCGGCCAGGGCTCACGACGTCGCCGCTTTAACCATCAAAGGCAAATCGGCGATTCTCAACTTTCCGGAGATGGCCGGAATACTTCCTCGGCCGTCTTCGAACTCTCCACGTGACGTTCAAGTCGCCGCTGCTCTGGCCGCTTCAATGGAGGCTCTTCCGGCGACTCCTCCAGAATCGTCACATCCTCCGCCGTCCGAACAGTCATCTTCATCCTCCTCATTTGATGTTTCGTATCCGAAGGAGCTAAGCGAGACAGTACAAATTCCGAGTTTAGGAACGAGCTACGAATCGCCAGAGTCACAATTCCTGTTCCATGACTCAGAACATCGGTGGCTTTACACAGAGAATTACAATTACTTCACCGATCAGATATCGATGGCGGAGACAGAAAGCTTCGATATTTTCTTATGGCACCATTAA 660 52.12 MADAFNSPTEPSTTNSFFSPRSTSFSGPDPKKSKRTRNSEGKHPVYRGVRMRAWGKWVSEIREPRKKSRIWLGSFSTPEMAARAHDVAALTIKGKSAILNFPEMAGILPRPSSNSPRDVQVAAALAASMEALPATPPESSHPPPSEQSSSSSSFDVSYPKELSETVQIPSLGTSYESPESQFLFHDSEHRWLYTENYNYFTDQISMAETESFDIFLWHH 219
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 23387605 23388264 - Bpe010057.1 Bpe02g02241 100390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe02g02241 219 ProSiteProfiles AP2/ERF domain profile. 45 102 IPR001471 GO:0003700|GO:0006355
Bpe02g02241 219 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 3-LIKE 11 202 - -
Bpe02g02241 219 SUPERFAMILY DNA-binding domain 45 102 IPR016177 GO:0003677
Bpe02g02241 219 SMART rav1_2 45 108 IPR001471 GO:0003700|GO:0006355
Bpe02g02241 219 MobiDBLite consensus disorder prediction 132 156 - -
Bpe02g02241 219 Pfam AP2 domain 44 94 IPR001471 GO:0003700|GO:0006355
Bpe02g02241 219 PRINTS Ethylene responsive element binding protein signature 68 84 IPR001471 GO:0003700|GO:0006355
Bpe02g02241 219 PRINTS Ethylene responsive element binding protein signature 46 57 IPR001471 GO:0003700|GO:0006355
Bpe02g02241 219 CDD AP2 46 103 IPR001471 GO:0003700|GO:0006355
Bpe02g02241 219 MobiDBLite consensus disorder prediction 1 46 - -
Bpe02g02241 219 MobiDBLite consensus disorder prediction 28 46 - -
Bpe02g02241 219 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 11 202 - -
Bpe02g02241 219 MobiDBLite consensus disorder prediction 1 27 - -
Bpe02g02241 219 Gene3D AP2/ERF domain 45 104 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g02241 Bpe-Chr2:23387605 Bpe14g00516 Bpe-Chr14:4538438 1.10E-54 dispersed
Bpe05g01037 Bpe-Chr5:22946413 Bpe02g02241 Bpe-Chr2:23387605 1.05E-35 dispersed
Bpe02g02241 Bpe-Chr2:23387605 Bpe02g02242 Bpe-Chr2:23393593 1.02E-105 tandem
Bpe01g00552 Bpe-Chr1:3582125 Bpe02g02241 Bpe-Chr2:23387605 2.81E-65 wgd
Bpe13g01287 Bpe-Chr13:18029116 Bpe02g02241 Bpe-Chr2:23387605 2.14E-97 wgd
Bpe02g02241 Bpe-Chr2:23387605 Bpe08g00494 Bpe-Chr8:3241344 1.55E-59 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
21044 PF00847 AP2 5.60E-13 CL0081 Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe02g02241 K09286 - tcc:18588535 235.343