Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bpe02g02242 | ATGTTAAACTCAGCTACTGAGTCAAGTGCCACCCACTCGTCTTCCTCCCCTAGCTGCTCTTCTTCTTCTTCTTCTTCTTCTTCTTCAGGACCCGACCTGAAGAAGAGTAAGCGAACCCGAGATAGTAACGGTAAACACCCGGTTTACAGAGGAGTACGGATGCGGGTTTGGGGAAAATGGGTATCTGAAATCCGAGAACCCAGAAAGAAGAGCCGGATTTGGCTCGGAACTTTTTCGACGCCGGAAATGGCGGCCAGAGCTCATGATGTCGCTGCTTTAACTATCAAGGGGAAATCGGCGATCCTCAACTTTCCAGAAATGGCAGGAATACTTCCTCGGCCGTCTTCGAACTCTCCCCGTGACGTTCAAGCCGCCGCTGCTCTGGCCGCTTCAATGGAGGTTCTTCCGGCGACTCCTCCAGATTCGTCACATCCCCCGACGTCTGAACCGTCATCTTCATCATCCTCATTCAACGTTCCATCTCCGGAGGAACTGAGTGAGATAGTTCAACTTCCTAGTTTAGGAACGAGCTATGAATCGCCAGAGTCGCAATTCGTGCTCCATGACTCAGAAGATCGGTGGCTTTACACAGAGAATTACGAGTACTTCGGTGATCAGATATCAATGGCGGAGACAGAAAGCTTCGATTTTTTCTTTTGGCGCCATTAA | 669 | 50.07 | MLNSATESSATHSSSSPSCSSSSSSSSSSGPDLKKSKRTRDSNGKHPVYRGVRMRVWGKWVSEIREPRKKSRIWLGTFSTPEMAARAHDVAALTIKGKSAILNFPEMAGILPRPSSNSPRDVQAAAALAASMEVLPATPPDSSHPPTSEPSSSSSSFNVPSPEELSEIVQLPSLGTSYESPESQFVLHDSEDRWLYTENYEYFGDQISMAETESFDFFFWRH | 222 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 23393593 | 23394261 | - | Bpe010058.1 | Bpe02g02242 | 100391 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bpe02g02242 | 222 | PANTHER | ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED | 4 | 202 | - | - | |
Bpe02g02242 | 222 | MobiDBLite | consensus disorder prediction | 33 | 47 | - | - | |
Bpe02g02242 | 222 | MobiDBLite | consensus disorder prediction | 1 | 47 | - | - | |
Bpe02g02242 | 222 | Gene3D | AP2/ERF domain | 48 | 107 | IPR036955 | GO:0003700|GO:0006355 | |
Bpe02g02242 | 222 | PANTHER | DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 3-LIKE | 4 | 202 | - | - | |
Bpe02g02242 | 222 | SUPERFAMILY | DNA-binding domain | 48 | 105 | IPR016177 | GO:0003677 | |
Bpe02g02242 | 222 | SMART | rav1_2 | 48 | 111 | IPR001471 | GO:0003700|GO:0006355 | |
Bpe02g02242 | 222 | PRINTS | Ethylene responsive element binding protein signature | 49 | 60 | IPR001471 | GO:0003700|GO:0006355 | |
Bpe02g02242 | 222 | PRINTS | Ethylene responsive element binding protein signature | 71 | 87 | IPR001471 | GO:0003700|GO:0006355 | |
Bpe02g02242 | 222 | Pfam | AP2 domain | 47 | 97 | IPR001471 | GO:0003700|GO:0006355 | |
Bpe02g02242 | 222 | MobiDBLite | consensus disorder prediction | 1 | 32 | - | - | |
Bpe02g02242 | 222 | CDD | AP2 | 49 | 106 | IPR001471 | GO:0003700|GO:0006355 | |
Bpe02g02242 | 222 | MobiDBLite | consensus disorder prediction | 135 | 162 | - | - | |
Bpe02g02242 | 222 | MobiDBLite | consensus disorder prediction | 147 | 162 | - | - | |
Bpe02g02242 | 222 | ProSiteProfiles | AP2/ERF domain profile. | 48 | 105 | IPR001471 | GO:0003700|GO:0006355 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bpe01g00552 | Bpe-Chr1:3582125 | Bpe02g02242 | Bpe-Chr2:23393593 | 2.46E-65 | dispersed | |
Bpe02g02242 | Bpe-Chr2:23393593 | Bpe13g01287 | Bpe-Chr13:18029116 | 6.16E-96 | dispersed | |
Bpe02g02241 | Bpe-Chr2:23387605 | Bpe02g02242 | Bpe-Chr2:23393593 | 1.02E-105 | tandem |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
21045 | PF00847 | AP2 | 2.40E-13 | CL0081 | Bpe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bpe02g02242 | K09286 | - | tcc:18588535 | 232.646 |