Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe02g02274 ATGGAGACGTTGGTGCAGGAGGTGGTAACGGCTTCACCGTCGGATAGAACTACGACGATGTTTGGATTCGTTGCCTGGGAGGAGGTGTTTGTGTCGAGCGATAAAGGGAGGAGAGAGGTCCATTATTATCTGAAGCGCGAAGACGGGAGCTCAGATCTGGCGGTGATAGGGAAGGAACGGAGCTTGAGGCACATGTCTTATGCGTATGCGATGCGTAATCGAGCTCTTGTTTCGCCCGGGCCGTTTTCGTCGCTCCCAAAACTTAAGTCCCGGAGAGACGTGATTGATTGGCTTGACTCAATTGTTTCAGGTATATACACCTCTCTCTCTTTTTCTCCTTCTCCATCGCCTTTCTCCCTTATTTTAATATCTTCTCCGTTAGATATTCAATTACGGAAGTCAGGGCAGCATACTAGAGAATTTTCATGGTTAGGCTCTCCTTGGACGTGCAGAAAAAGGCGCAGACATTTTCAGTCTTTTTGTAGGAATGGCATTGAAATCTCTGTTTACGATTTTGTTTATGTTCTTGCTGAGGAAGACCAACGACTTGTTGCTTACTTGGAAGATATGTATGAGGATTCTAGAGGCAGCAAAATGGTTGTGGTACGATGGTTTCACAAAATTGATGAGGTTGATATTGCTTTGCCTCGTCATTTTAATGACAGGGAGATTTTCTTTTCTCTGTGTCTTCAAGATCTCAGTATTGAGTGCATAGATGGATTGGCTGTGGTCCTCAGTTCCCAGCATTTTGAGAAATTTTTCAGTGAGGCAATAAGCCTTAAGTTGGAACCATATCTCTGCAGAAAGCAATTTGACAATGATGATGTCAAGCCTTTTGATATTACCCAAGTCAAAGGTTATTGGAAGCAGGAAATTCTTAGATATATGTATACTCTCCCCTCACTTAAGCCCGATGGCTCTTCAGAGCAGTCTGATGGCGCTGATGACGAAGAAACTGAAAATACTTTATGTGTCATAGCTAAAAAGAGGCGGCTTTTAAGTGATGATGACATGAACCATGACAGCAAAAAGTGGAAGGACAAAGCTTCTCATCAACTTCAATGTTTGAGTAGTGTGACGGATGATAAAGGTAGAACTGGAGCATCTAATCAGAATGGAGGTGTTTCTGCCAGAATTTTGGCTAGGAAAGAGACACAACAAAAGTCCCCTCTTTATTTAGCGGTGGGTTCTGAAGTTGAGGTCCTTTCGCAAGACAGTGGGATTAGAGGGTGTTGGTTTAGAGCAAAAATAATCAAGAAGCACAAGGACAAAATAAAGATTCAATATCAAGATCTTCAGGATGCAGATGATGAATCTAACGAACTCGTGGAATGGATTTCTGCAACCAGAGTTGCTGCCCCGGATCACTTAGGTCTACGGTTTAGTCGGAGGCCTACTATTCGCCCACCTCTTCAGTCTAACAAAGGCATTGTGCCCTTAAAGCTTGGTATTGGGTCAGTAGTTGATGTGTGGTGGCACGATGGATGGTGGGAAGGTATTGTGGTCCAGAGAGAATCTGAAGACAAGCTTCAAGTGCATTTCCCAGGAGAAAAGAAAGAGTCAACTTTTGGGCTAAGTGATTTGAGGCTTTCTCGAGAATGGCTAGGAAGTGGGTGGATGGATATTAAGGAAAGGCCAGATATTGCCGCCACTCTTTCAAGCGTGGAAAAACAAAAAGTTGGAGTCATTTGTGACACAAGCCAATCTGGAAAAGATGAATCTACATATGAAATATCTTGCCTGGATGCTGGATATGACAATAAAAAGGGGTTTTGTAGGGTTCCTGATCTTTCAAAGGATAACTCACTCAGTAAATTGAAGTGGAGTTCATCAAGAAAGCGAAGTCATATTAATGTGATCACTTTCCAGAAGCCACATTTTGACGTCAAGCGAAGTAGAAGCATTTTCCCATCCCGAACGAAGGAAAGCTTTTTTATTTCCACACCCTTGAAAGTTGATCATGAAAATTGCAAGCAAATTGAAGAGTTCCCGTTTTGTTCATCCGTCGTGGCTCCTTTAACAAGCTTGGTAATGTCCAGGTGA 2043 42.98 METLVQEVVTASPSDRTTTMFGFVAWEEVFVSSDKGRREVHYYLKREDGSSDLAVIGKERSLRHMSYAYAMRNRALVSPGPFSSLPKLKSRRDVIDWLDSIVSGIYTSLSFSPSPSPFSLILISSPLDIQLRKSGQHTREFSWLGSPWTCRKRRRHFQSFCRNGIEISVYDFVYVLAEEDQRLVAYLEDMYEDSRGSKMVVVRWFHKIDEVDIALPRHFNDREIFFSLCLQDLSIECIDGLAVVLSSQHFEKFFSEAISLKLEPYLCRKQFDNDDVKPFDITQVKGYWKQEILRYMYTLPSLKPDGSSEQSDGADDEETENTLCVIAKKRRLLSDDDMNHDSKKWKDKASHQLQCLSSVTDDKGRTGASNQNGGVSARILARKETQQKSPLYLAVGSEVEVLSQDSGIRGCWFRAKIIKKHKDKIKIQYQDLQDADDESNELVEWISATRVAAPDHLGLRFSRRPTIRPPLQSNKGIVPLKLGIGSVVDVWWHDGWWEGIVVQRESEDKLQVHFPGEKKESTFGLSDLRLSREWLGSGWMDIKERPDIAATLSSVEKQKVGVICDTSQSGKDESTYEISCLDAGYDNKKGFCRVPDLSKDNSLSKLKWSSSRKRSHINVITFQKPHFDVKRSRSIFPSRTKESFFISTPLKVDHENCKQIEEFPFCSSVVAPLTSLVMSR 680
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 23580842 23584338 + Bpe010092.1 Bpe02g02274 100423

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bpe02g02274 680 Pfam BAH domain 166 273 IPR001025 GO:0003682
Bpe02g02274 680 Gene3D - 132 292 IPR043151 -
Bpe02g02274 680 SMART BAH_4 165 282 IPR001025 GO:0003682
Bpe02g02274 680 ProSiteProfiles BAH domain profile. 165 282 IPR001025 GO:0003682
Bpe02g02274 680 Coils Coil 418 438 - -
Bpe02g02274 680 Pfam Agenet domain 396 469 IPR008395 -
Bpe02g02274 680 SMART agenet_At_2 391 457 IPR014002 -
Bpe02g02274 680 SMART agenet_At_2 480 536 IPR014002 -
Bpe02g02274 680 PANTHER AGENET AND BROMO-ADJACENT HOMOLOGY (BAH) DOMAIN-CONTAINING PROTEIN 15 679 - -
Bpe02g02274 680 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 15 679 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe02g02274 - - - qsu:112026445 690.649
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g02274 Bpe-Chr2:23580842 Bpe05g00570 Bpe-Chr5:19820949 7.41E-09 dispersed
Bpe02g01023 Bpe-Chr2:10559108 Bpe02g02274 Bpe-Chr2:23580842 1.04E-94 transposed
Bpe11g00579 Bpe-Chr11:4419244 Bpe02g02274 Bpe-Chr2:23580842 1.28E-103 transposed
Bpe13g01340 Bpe-Chr13:18642038 Bpe02g02274 Bpe-Chr2:23580842 1.18E-24 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi1g294 Blo01g00495 Blo16g01057 Bda01g02081 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Bpe02g02274 . . . . . . . . Car15g00849 . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0004134 1 5 2 1 1 1 2 1 1 1 1 1 2 1 1 2 1 2 2 1 1 1 1 1 1 1 1 4 1 2 44