Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bpe02g02281 | ATGGCTGGGGAGATGGGTTTCAAACAGTACGTTGAGGCGTTAAAGGAAGAACGACGGAAAATTACGGTTTTCCAGCGGGAACTGCCGCTCTGTTTAGAACTTATCACGCAAGCGATTGAGTCTTGTACGCAGCAGTTGTCAGGGACGACGACGGAGTGTTTTAATGGAGGACAATCCGAGTGCTCGGAGCAGACTTCCAGTGAAGGTCCCGTGTTGGAGGAATTTATCCCGGTTAAAAGAGCTCTATCTTCTGAGTTCTCCGGCGAAGAGAAAAAATCCCTGAAAATGAGAAAGGAGAGCAAGAATAGCGACAAGAAGAAAGCTGGTCAGTCGGATTGGCTCAAATCTGCTCAGCTATGGAATCAAGCTCCAGATCCTGACGGTGTACCGACCAAGACGGTGGTTGTGGAAGTTAAGAGGAATGGCGGAGCTTTCCGGCCATTCCACCGAGAGAAAGTCATCGAAAAGACAAACCAACCCGACGGAAAAGCACCGACGGCAAATGCAAGATCAACGGCGGAAACATCTTCTCATAGCAGCATCAGACGAGAAGAGAAAGACGAACAGGGTAAAAGAAAGAACCGGCGGTGCTGGTCACCGGAGCTGCATCGCCGATTCTTGCGCGCTCTTCACCAGCTCGGAGGATCAAACGTGGCGACGCCAAAGCAGATTAGAGAACTGATGAAATTGGATGGTCTAACAAACGACGAAGTCAAAAGCCATTTACAGAAATATCGTTTGCATACCAGAAGATCGAGTCCTCCGGCGTTTAACAGTAGCGTCCAACCGTCGCCACAATATGTGGTAGTGGGTGGAATATGGGTGCCACCGCCGGACTTTGCGGTGGCACCGGCGAGCACTGTTACCAGCGAGGCTAATGGAATGTACGTGGTACCAGCTTCGGTATCGGAGGCTTCAGGTTGTGGGGTTAAAAGGCCACAACCAAAACGATTAGCTGAGACGAACTCTGAAGGAAGAAAGGTCAGCGAAGGTGGAGATGGTGTTGTCCATTCTAATTCTCCGGCGACGTCGTCTTCCACCCACACTTCCACAGCATCCCCGTTTCTTTGA | 1071 | 50.61 | MAGEMGFKQYVEALKEERRKITVFQRELPLCLELITQAIESCTQQLSGTTTECFNGGQSECSEQTSSEGPVLEEFIPVKRALSSEFSGEEKKSLKMRKESKNSDKKKAGQSDWLKSAQLWNQAPDPDGVPTKTVVVEVKRNGGAFRPFHREKVIEKTNQPDGKAPTANARSTAETSSHSSIRREEKDEQGKRKNRRCWSPELHRRFLRALHQLGGSNVATPKQIRELMKLDGLTNDEVKSHLQKYRLHTRRSSPPAFNSSVQPSPQYVVVGGIWVPPPDFAVAPASTVTSEANGMYVVPASVSEASGCGVKRPQPKRLAETNSEGRKVSEGGDGVVHSNSPATSSSTHTSTASPFL | 356 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 23606081 | 23607633 | - | Bpe010098.1 | Bpe02g02281 | 100430 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bpe02g02281 | 356 | MobiDBLite | consensus disorder prediction | 336 | 356 | - | - | |
Bpe02g02281 | 356 | SUPERFAMILY | Homeodomain-like | 191 | 251 | IPR009057 | - | |
Bpe02g02281 | 356 | MobiDBLite | consensus disorder prediction | 304 | 356 | - | - | |
Bpe02g02281 | 356 | PANTHER | TRANSCRIPTION FACTOR HHO2 | 7 | 351 | - | - | |
Bpe02g02281 | 356 | MobiDBLite | consensus disorder prediction | 177 | 196 | - | - | |
Bpe02g02281 | 356 | Pfam | Myb-like DNA-binding domain | 195 | 246 | IPR001005 | - | |
Bpe02g02281 | 356 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 190 | 250 | IPR017930 | - | |
Bpe02g02281 | 356 | MobiDBLite | consensus disorder prediction | 86 | 111 | - | - | |
Bpe02g02281 | 356 | MobiDBLite | consensus disorder prediction | 161 | 176 | - | - | |
Bpe02g02281 | 356 | MobiDBLite | consensus disorder prediction | 146 | 196 | - | - | |
Bpe02g02281 | 356 | Gene3D | - | 192 | 250 | - | - | |
Bpe02g02281 | 356 | PANTHER | MYB FAMILY TRANSCRIPTION FACTOR | 7 | 351 | IPR044787 | GO:0003700|GO:0006355 | |
Bpe02g02281 | 356 | MobiDBLite | consensus disorder prediction | 86 | 112 | - | - | |
Bpe02g02281 | 356 | TIGRFAM | myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class | 193 | 248 | IPR006447 | GO:0003677 | |
Bpe02g02281 | 356 | MobiDBLite | consensus disorder prediction | 317 | 331 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Bpe02g02281 | Bpe13g01332 | CCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bpe02g02047 | Bpe-Chr2:22036990 | Bpe02g02281 | Bpe-Chr2:23606081 | 3.43E-58 | dispersed | |
Bpe02g02281 | Bpe-Chr2:23606081 | Bpe13g01076 | Bpe-Chr13:16340578 | 9.20E-62 | dispersed | |
Bpe13g01332 | Bpe-Chr13:18565463 | Bpe02g02281 | Bpe-Chr2:23606081 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
21049 | PF00249 | Myb_DNA-binding | 2.70E-07 | CL0123 | Bpe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bpe02g02281 | - | - | tcc:18610532 | 360.533 |