Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe02g02281 ATGGCTGGGGAGATGGGTTTCAAACAGTACGTTGAGGCGTTAAAGGAAGAACGACGGAAAATTACGGTTTTCCAGCGGGAACTGCCGCTCTGTTTAGAACTTATCACGCAAGCGATTGAGTCTTGTACGCAGCAGTTGTCAGGGACGACGACGGAGTGTTTTAATGGAGGACAATCCGAGTGCTCGGAGCAGACTTCCAGTGAAGGTCCCGTGTTGGAGGAATTTATCCCGGTTAAAAGAGCTCTATCTTCTGAGTTCTCCGGCGAAGAGAAAAAATCCCTGAAAATGAGAAAGGAGAGCAAGAATAGCGACAAGAAGAAAGCTGGTCAGTCGGATTGGCTCAAATCTGCTCAGCTATGGAATCAAGCTCCAGATCCTGACGGTGTACCGACCAAGACGGTGGTTGTGGAAGTTAAGAGGAATGGCGGAGCTTTCCGGCCATTCCACCGAGAGAAAGTCATCGAAAAGACAAACCAACCCGACGGAAAAGCACCGACGGCAAATGCAAGATCAACGGCGGAAACATCTTCTCATAGCAGCATCAGACGAGAAGAGAAAGACGAACAGGGTAAAAGAAAGAACCGGCGGTGCTGGTCACCGGAGCTGCATCGCCGATTCTTGCGCGCTCTTCACCAGCTCGGAGGATCAAACGTGGCGACGCCAAAGCAGATTAGAGAACTGATGAAATTGGATGGTCTAACAAACGACGAAGTCAAAAGCCATTTACAGAAATATCGTTTGCATACCAGAAGATCGAGTCCTCCGGCGTTTAACAGTAGCGTCCAACCGTCGCCACAATATGTGGTAGTGGGTGGAATATGGGTGCCACCGCCGGACTTTGCGGTGGCACCGGCGAGCACTGTTACCAGCGAGGCTAATGGAATGTACGTGGTACCAGCTTCGGTATCGGAGGCTTCAGGTTGTGGGGTTAAAAGGCCACAACCAAAACGATTAGCTGAGACGAACTCTGAAGGAAGAAAGGTCAGCGAAGGTGGAGATGGTGTTGTCCATTCTAATTCTCCGGCGACGTCGTCTTCCACCCACACTTCCACAGCATCCCCGTTTCTTTGA 1071 50.61 MAGEMGFKQYVEALKEERRKITVFQRELPLCLELITQAIESCTQQLSGTTTECFNGGQSECSEQTSSEGPVLEEFIPVKRALSSEFSGEEKKSLKMRKESKNSDKKKAGQSDWLKSAQLWNQAPDPDGVPTKTVVVEVKRNGGAFRPFHREKVIEKTNQPDGKAPTANARSTAETSSHSSIRREEKDEQGKRKNRRCWSPELHRRFLRALHQLGGSNVATPKQIRELMKLDGLTNDEVKSHLQKYRLHTRRSSPPAFNSSVQPSPQYVVVGGIWVPPPDFAVAPASTVTSEANGMYVVPASVSEASGCGVKRPQPKRLAETNSEGRKVSEGGDGVVHSNSPATSSSTHTSTASPFL 356
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 23606081 23607633 - Bpe010098.1 Bpe02g02281 100430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe02g02281 356 MobiDBLite consensus disorder prediction 336 356 - -
Bpe02g02281 356 SUPERFAMILY Homeodomain-like 191 251 IPR009057 -
Bpe02g02281 356 MobiDBLite consensus disorder prediction 304 356 - -
Bpe02g02281 356 PANTHER TRANSCRIPTION FACTOR HHO2 7 351 - -
Bpe02g02281 356 MobiDBLite consensus disorder prediction 177 196 - -
Bpe02g02281 356 Pfam Myb-like DNA-binding domain 195 246 IPR001005 -
Bpe02g02281 356 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 190 250 IPR017930 -
Bpe02g02281 356 MobiDBLite consensus disorder prediction 86 111 - -
Bpe02g02281 356 MobiDBLite consensus disorder prediction 161 176 - -
Bpe02g02281 356 MobiDBLite consensus disorder prediction 146 196 - -
Bpe02g02281 356 Gene3D - 192 250 - -
Bpe02g02281 356 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 7 351 IPR044787 GO:0003700|GO:0006355
Bpe02g02281 356 MobiDBLite consensus disorder prediction 86 112 - -
Bpe02g02281 356 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 193 248 IPR006447 GO:0003677
Bpe02g02281 356 MobiDBLite consensus disorder prediction 317 331 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe02g02281 Bpe13g01332 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g02047 Bpe-Chr2:22036990 Bpe02g02281 Bpe-Chr2:23606081 3.43E-58 dispersed
Bpe02g02281 Bpe-Chr2:23606081 Bpe13g01076 Bpe-Chr13:16340578 9.20E-62 dispersed
Bpe13g01332 Bpe-Chr13:18565463 Bpe02g02281 Bpe-Chr2:23606081 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
21049 PF00249 Myb_DNA-binding 2.70E-07 CL0123 Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe02g02281 - - tcc:18610532 360.533