Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe02g02282 ATGGATGGGAGTTGCATCGATGAGAGCACAGCTAGCGACACTACGTCTACTTCTCCTGTTACCAAGTCTTCTTCGCCGGCGAGTCTACGTCGTCTTGGTAGCGGCGCCAGCGTTATCATAGACTCGGATTTTAACGGTGTGGAGGCGGAGTCCCGGAAGCTGCCATCTTCTCGGTTCAAAGGCGTCGTCCCCCAGCCGAACGGACGGTGGGGATCTCAAATATACGAGAAGCACCAGCGAGTATGGCTCGGCACTTTCAACGAAGAAGACGAAGCTGCAAGGGCATACGATGTCGCCGCCAGGCGATTCCGCGGCCGTGATGCTGTGACGAACTTCAAGCGGTCGGAGATCGGAGAAGACGAAAAGGAAGAGGCTTTTTTGGTTTCCCATTCGAAGGCTGAGATCGTCGATATGCTGCGTAAGCATACATACAAAGAGGAGCTTCTGCAGTGCAGGAGAAACTACAAGGCTAACGCCGTGGACGGGAAACTGAACAGAACGGAGTCAGGGTTCGTAAAATCGTGGTTACCGGATCATCGTGAGCTTCTGTTCGAAAAGGCGGTGACGCCGAGCGACGTCGGAAAGCTGAACCGGCTCGTCATCCCGAAGCAATACGCCGAGAAACACTTCCCGTTGCAGGCCGCCGGAACCGATTCGCGTAGAGGTTTTCTTTTGAATTTCGAGGATGCCGGAGGTAAAGTATGGAGGTTCAGGTATTCATACTGGAACAGTAGCCAGAGCTACGTGCTGACCAAAGGTTGGAGCCGGTTCGTGAAGGAGAAGAACATGAACTCCGGTGACATTGTTAGCTTTTTCCGATCAACCGAAGGAGATAAGCAGCTTTATATTGGATCGAAAAAGAGGACCACAAATCCTGTCCAGACAGTGAGACTGTTTGGAGTGGATATAATGAAAGTAGAAGAAAGAGGTGGAGAAGAGAAGAATGGAGGATGTAACGAGAAGAGAAGAAGAGATATGGAGCAGTGGGCAGTAGAACGTAGGAAGAAGCAAAGACTATTTGGAGTTCTGTAA 1032 51.07 MDGSCIDESTASDTTSTSPVTKSSSPASLRRLGSGASVIIDSDFNGVEAESRKLPSSRFKGVVPQPNGRWGSQIYEKHQRVWLGTFNEEDEAARAYDVAARRFRGRDAVTNFKRSEIGEDEKEEAFLVSHSKAEIVDMLRKHTYKEELLQCRRNYKANAVDGKLNRTESGFVKSWLPDHRELLFEKAVTPSDVGKLNRLVIPKQYAEKHFPLQAAGTDSRRGFLLNFEDAGGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNMNSGDIVSFFRSTEGDKQLYIGSKKRTTNPVQTVRLFGVDIMKVEERGGEEKNGGCNEKRRRDMEQWAVERRKKQRLFGVL 343
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 23612580 23613611 - Bpe010099.1 Bpe02g02282 100431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe02g02282 343 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 1 343 IPR044800 GO:0003700
Bpe02g02282 343 CDD AP2 57 112 IPR001471 GO:0003700|GO:0006355
Bpe02g02282 343 Gene3D AP2/ERF domain 57 114 IPR036955 GO:0003700|GO:0006355
Bpe02g02282 343 ProSiteProfiles B3 DNA-binding domain profile. 184 289 IPR003340 GO:0003677
Bpe02g02282 343 SUPERFAMILY DNA-binding pseudobarrel domain 180 283 IPR015300 -
Bpe02g02282 343 ProSiteProfiles AP2/ERF domain profile. 58 113 IPR001471 GO:0003700|GO:0006355
Bpe02g02282 343 SUPERFAMILY DNA-binding domain 57 114 IPR016177 GO:0003677
Bpe02g02282 343 SMART B3_2 184 287 IPR003340 GO:0003677
Bpe02g02282 343 CDD B3_DNA 183 274 IPR003340 GO:0003677
Bpe02g02282 343 Gene3D - 177 296 IPR015300 -
Bpe02g02282 343 SMART rav1_2 58 119 IPR001471 GO:0003700|GO:0006355
Bpe02g02282 343 PANTHER PROTEIN RAV1, PUTATIVE-RELATED 1 343 - -
Bpe02g02282 343 Pfam B3 DNA binding domain 184 284 IPR003340 GO:0003677
Bpe02g02282 343 MobiDBLite consensus disorder prediction 1 29 - -
Bpe02g02282 343 Pfam AP2 domain 58 105 IPR001471 GO:0003700|GO:0006355
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe02g02282 Bpe10g00947 CCT
Bpe02g02282 Bpe10g00947 ECH
Bpe02g02282 Bpe11g01690 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g02282 Bpe-Chr2:23612580 Bpe10g00947 Bpe-Chr10:15006814 3.73E-146 dispersed
Bpe01g00642 Bpe-Chr1:4328387 Bpe02g02282 Bpe-Chr2:23612580 6.10E-54 transposed
Bpe03g00937 Bpe-Chr3:29034603 Bpe02g02282 Bpe-Chr2:23612580 4.75E-11 transposed
Bpe11g01690 Bpe-Chr11:13188925 Bpe02g02282 Bpe-Chr2:23612580 2.79E-151 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
21050 PF02362 B3 1.40E-26 CL0405 Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe02g02282 K09287 - csv:101203784 416.387