Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe02g02285 GAGGAGATGGCTGTTGTTGCAGCAGGAGGAGTAGGTCTAGACGTGACCAAGCTTCAACCTCATCGGTCGCCACTCGCTTCCCCCTTTCTCGGTAAAAAGCTTAGAATCAAACCCAACTTTTATTTACGTCCAAATTCGAGAATCGATGCCTCTCCTGTGAGAAAATCCCTTGTTTTGGCTTCGGGAGGGGGGTTAATCGATGCGATTCATGGCCTTTTTCTGGGTGTTGGGGTGGGGCTTCCTTGCACAGTTATGGAGTGCGGTGATATTATCTACAGAAGCACTCTGCCGAAGCCCAGCGGCTTAACACTCACAATTCCTGGTGCTATTCTTGCTCTTAGCACTGTTTCTTATCTCTGGGCAACTCCTGGTGTTGCTCCCGGCTTTTTTGATATGTTTGTTCTTGCATTTGTGGAACGAATTGTTAGACCCACTTTTAAAAAGGATGATTTTGTTTTGGGGAAGAAGTTGGGAGAGGGAGCTTTTGGTGTGGTTTACAGAGTTTCGTTAGCGAAGAAGCCTTCCGATAAGAAAGAGGGCGATTTAGTGCTGAAGAAGGCTACCGAGTATGGTGCAGTCGAGATTTGGATGAATGAGCGAGCCCGAAGAGCTTGTGCAAATAGTTGTGCAGATTTTGTTTATGGCTTTCTTGAGGGCTCTTCCAAAAAAGGATCTGAATATTGGCTCATTTGGCGGTATGAAGGGGAGGCCACTTTGGCTGATTTGATTCAAAGCAAAGATTTCCCGTACAATGTAGAGACTATGATTCTTGGTGAAGCTCAAGAGTTGCCCAAGGGGTTGGAAAGAGAGAACAAAATCATTCAGACTATCATGAGACAGCTCTTGTTTGCATTGGATAGTCTTCATTCGGTCGGCATTGTTCATCGTGATATAAAGCCACAAAATATCATTTTCTCTGAAGCAGGGTCTCGTACGTTCAAAATTATTGATCTTGGAGCTGCAGCTGATTTAAGAGTAGGCATTAACTACATTCCAAAGGAATTTCTTCTGGATCCGAGATATGCCGCCCCCGAGCAATACATCATGAGTACACAAACTCCATCTGCTCCATCAGCACCTGTAGCAACTGCACTTTCCCCTGTTCTTTGGCAGATGAATCTTCCTGATAGATTCGACATCTATAGTGCCGGTCTCATCTTCTTACAAATGGCATTTCCCGGATTTCGAACAGACAGCAGTCTCATACAATTCAACAGGCAATTGAAGAGGTGTGATTATGACCTGGTAGAATGGAGGAAAAGCGTGGAGCCTCGGGCTAGCCCAGAACTCCGGAAAGGATTCGAATTGCTCGATTTAGATGGAGGAATTGGGTGGGAACTTTTGACATCTATGGTTCGATACAAGGCTAGACAAAGAACTAGTGCAAAGGCAGCTTTGGCTCATCCATATTTCGACCGAGAAGGCCTTCTGGCATTATCGTTTATGCAGAAACTCAGACGACAATTTTTTCGAGCAACTCAGCAGGATTCTAGTGAAGCTGCCAGCTGGGTTGTTGGGTTGATGGCTAAATCAGGAACTGAGCAAGTCGGTGGCTTCACTGAAGCTCAGCTTCAAGAGCTCAGAGTCAGTTTCAGTGCAAAACTTTCAAATTTTCCTTTTTTTGGTTGCATTCTTTTAGTGTTTTGTACATTTTTGTTGCAGGAAATGGAGCCAAAGAAGAAAGCAAGTCCTCAGAGAAATGCTCTTGCTTCAGTCCTTAAGCTTCAGAGGAAGATCATAAAGACAATAAACGAGAGTATGGACGAGCTCAATCGACCTGCAAAGAATATATGGTGGAGAAGATGGATTCCAAGAGAAGAATAA 1824 44.52 EEMAVVAAGGVGLDVTKLQPHRSPLASPFLGKKLRIKPNFYLRPNSRIDASPVRKSLVLASGGGLIDAIHGLFLGVGVGLPCTVMECGDIIYRSTLPKPSGLTLTIPGAILALSTVSYLWATPGVAPGFFDMFVLAFVERIVRPTFKKDDFVLGKKLGEGAFGVVYRVSLAKKPSDKKEGDLVLKKATEYGAVEIWMNERARRACANSCADFVYGFLEGSSKKGSEYWLIWRYEGEATLADLIQSKDFPYNVETMILGEAQELPKGLERENKIIQTIMRQLLFALDSLHSVGIVHRDIKPQNIIFSEAGSRTFKIIDLGAAADLRVGINYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQMNLPDRFDIYSAGLIFLQMAFPGFRTDSSLIQFNRQLKRCDYDLVEWRKSVEPRASPELRKGFELLDLDGGIGWELLTSMVRYKARQRTSAKAALAHPYFDREGLLALSFMQKLRRQFFRATQQDSSEAASWVVGLMAKSGTEQVGGFTEAQLQELRVSFSAKLSNFPFFGCILLVFCTFLLQEMEPKKKASPQRNALASVLKLQRKIIKTINESMDELNRPAKNIWWRRWIPREE 607
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 23630490 23633506 + Bpe010102.1 Bpe02g02285 100434

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bpe02g02285 607 ProSitePatterns Protein kinases ATP-binding region signature. 157 185 IPR017441 GO:0005524
Bpe02g02285 607 CDD STKc_SNT7_plant 155 471 - -
Bpe02g02285 607 SUPERFAMILY Protein kinase-like (PK-like) 147 478 IPR011009 -
Bpe02g02285 607 Gene3D Transferase(Phosphotransferase) domain 1 256 475 - -
Bpe02g02285 607 Gene3D Phosphorylase Kinase; domain 1 137 232 - -
Bpe02g02285 607 SMART serkin_6 151 471 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe02g02285 607 Pfam Protein kinase domain 152 471 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe02g02285 607 PANTHER SERINE/THREONINE-PROTEIN KINASE STN7, CHLOROPLASTIC 25 607 - -
Bpe02g02285 607 ProSiteProfiles Protein kinase domain profile. 151 471 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe02g02285 607 PANTHER SERINE/THREONINE-PROTEIN KINASE STN8, CHLOROPLASTIC-RELATED 25 607 IPR044803 GO:0004674|GO:0009579
Bpe02g02285 607 ProSitePatterns Serine/Threonine protein kinases active-site signature. 293 305 IPR008271 GO:0004672|GO:0006468
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe02g02285 - - - mcha:111025494 919.072
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g00938 Bpe-Chr2:8275192 Bpe02g02285 Bpe-Chr2:23630490 1.79E-93 dispersed
Bpe02g02285 Bpe-Chr2:23630490 Bpe07g00306 Bpe-Chr7:2228421 1.09E-14 dispersed
Bpe07g01096 Bpe-Chr7:16283592 Bpe02g02285 Bpe-Chr2:23630490 9.18E-08 dispersed
Bpe02g02285 Bpe-Chr2:23630490 Bpe05g00781 Bpe-Chr5:21133411 4.80E-09 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi1g261 Blo01g00485 Blo16g01053 Bda01g02095 . . . . . . . . . . . . . Cpe01g01762 . . . . . . . . . . . . . . Cone13ag0856 Cone19ag0856 . . . . . . . . . . . Bpe02g02285 Bma01g00154 . . . . Cma04g02007 . . . . . Bhi12g01376 . . . . . . . . . . . . . . Csa05g01509 . Cme09g00814
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0010559 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2 1 1 1 1 1 1 1 1 2 1 1 1 32
       

Regulatory proteins

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63213 PF00069 Pkinase 1.30E-22 CL0016 Bpe PK