Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe02g02288 ATGAGTTGGAGGAGAATTGCCGAGTCCTTTCAAGCTCTTTTGGCTCATGCTTTGCTGTTCTCATGCGCACTTCTTCTAGCTATTAAGCTCGATCACGCTGTTTTGTACTCTTGGTGGTTAGTATTGATGGTATTTGCCCCTTTATGGCTTTTTCATGCAGTTGTGGCTCGAGGCAGATTTTCTCTTCCTGCTCCGGCATTACCTCACGATCGCTATTGGGCACCGTGGCATGCTGTCATGGCTATACCATTGCTTGTTGCTTTCGAACTACTTCTTTGCATTCATCTAATAAGTGGGGATGTTGTAAACTTGAAGATTGTTTTCACTCCTCTATTGGTCTTTGAAATAGCAATTTTGATCGATAATGTTAGGATGTGCAAGGCTTTGATGCCTGGAGAGGAGGAAACTATCAGTGATGAAATAATATGGAAGACACTCCCCCATTTCTGGGTTGCAATTTCTATGGTTTTCTTCATTGCTGCTACAATCTTCACTGTTTTGAAGCTAAGTGGAAATGCAGCTTCTCTAGGCTGGTGGGACTTATTTATAAACTTTGGAATTGCTGAGTGCTTTGCTTTTCTTGTTTTCACAAAATGGTATAATCCAGTAATTCATGGGAATGCTTTTAGAGAACCAAATAGGCGTTCGCATACTATTCGCAACCTTGATTGGATTAGTGGCAGTATGGTTTTTTCTGATGAAGATCAGCATCAAAGTCAATTATGCAACTTACAAGACCTGGGTGGGCATTTAATGAAAGTTCTGATGATCATTTTCCAAATCTTGCTTTTTATGCGCTTGGAGGGAACACCATCCAGTGTTAGACATATCCCTTGGAGGATTCTTTTTATTCCTCTTTATTTAATTCAAGGAATTGGGGTTATATTTGCTACCCATAGATTGGTAGAAAAAATTGTTCTACTAATTCGGGGATCCACTTCTCATAGATATTTTCTTCTATCGTCAAAAGCTCATGAATTTTTTGGATTCTTGCACCACGGATCAAGATTGCTTGGTTGGTGGTCAATTGATGAAGGAAGTCAAGAGGAACAAGCTAAACTTTATTGTGGCGGATCTTCTGGGTATAATACTTTCTCACTGGAGGCTGTGAAGCAAATGCCAAAATCTAATCTCATTGATGAGATTTGGAGATTACAAGCTGCTCTCAGTGAACAAACTGAAATTACGAAGTTTAGTCGGCAGGAGCATGAAAGACTACAAAATGAAAAAATTCTTTGTCGAATATGCTTTGCAGAGGAGATTAATGTGGTCCTCCTTCCCTGTCGGCATCACATTCTTTGCAGCACTTGCTGTGAGAAGTGCACGAGGTGCCCGATTTGTCGGGAGTCTATTGAAAGAGGAATGCTTGTACACGAAGTATAG 1383 40.42 MSWRRIAESFQALLAHALLFSCALLLAIKLDHAVLYSWWLVLMVFAPLWLFHAVVARGRFSLPAPALPHDRYWAPWHAVMAIPLLVAFELLLCIHLISGDVVNLKIVFTPLLVFEIAILIDNVRMCKALMPGEEETISDEIIWKTLPHFWVAISMVFFIAATIFTVLKLSGNAASLGWWDLFINFGIAECFAFLVFTKWYNPVIHGNAFREPNRRSHTIRNLDWISGSMVFSDEDQHQSQLCNLQDLGGHLMKVLMIIFQILLFMRLEGTPSSVRHIPWRILFIPLYLIQGIGVIFATHRLVEKIVLLIRGSTSHRYFLLSSKAHEFFGFLHHGSRLLGWWSIDEGSQEEQAKLYCGGSSGYNTFSLEAVKQMPKSNLIDEIWRLQAALSEQTEITKFSRQEHERLQNEKILCRICFAEEINVVLLPCRHHILCSTCCEKCTRCPICRESIERGMLVHEV 460
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 23648917 23655091 - Bpe010105.1 Bpe02g02288 100437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe02g02288 460 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 387 457 IPR013083 -
Bpe02g02288 460 SUPERFAMILY RING/U-box 404 452 - -
Bpe02g02288 460 Pfam Zinc finger, C3HC4 type (RING finger) 411 453 - -
Bpe02g02288 460 Pfam Transmembrane Fragile-X-F protein 28 288 IPR019396 -
Bpe02g02288 460 ProSiteProfiles Zinc finger RING-type profile. 413 448 IPR001841 -
Bpe02g02288 460 PANTHER TRANSMEMBRANE FRAGILE-X-F-ASSOCIATED PROTEIN 1 460 - -
Bpe02g02288 460 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 22 - -
Bpe02g02288 460 PANTHER TRANSMEMBRANE FRAGILE-X-F-ASSOCIATED PROTEIN 1 460 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g02288 Bpe-Chr2:23648917 Bpe12g00498 Bpe-Chr12:10791233 0 dispersed
Bpe02g02288 Bpe-Chr2:23648917 Bpe07g00730 Bpe-Chr7:13839610 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe02g02288 - - tcc:18610547 692.575