Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe02g02290 ATGCAAGGGTTTCCAGACCAGTATCTGATTCAACATCAACAGCAGATTTTTCAACACGAGCAAGAAAAGAGCGATGTGTACGGAGGAGGAAGAGAATTGATTTTCCCTGAAGTTTCACCGGTTTTACGCCCATGGTCGCTACCTCAAGTTCATCCCTTTAATCCGGCCCACTTTGCTCCAACTCCGGTTCGAGATCACAACACGTTTCAATCCCCTCCTTCGAACTCATATGATGATTTTTTCAACCGAAGAGCTCATGCTCTTCAGTTTGCATACGAAGTTCCGTCCTTCGACCACCTCAGAATCCTATCAAACTCTCTTGGACAACAGATTGAAACTGGTTCGGGATCTTTTGGTCTGCAATCGGAACTGGGGAAGATGACTGCTCAAGAAATAATGGACGCTAAGGCTCTCGCTGCTTCAAAAAGCCATAGTGAGGCTGAGAGAAGAAGAAGAGAGAGAATCAACAACCATCTTGCTAAATTGCGCAGTTTACTACCCAACACCACTAAAACAGATAAAGCTTCATTACTAGCAGAAGTAATACAACACGTTAAAGAACTTAAACGAGAGACTTCTTTGACAGCAGAAACAAGTCCAGTTCCGACGGAAATGGATGAACTGACAGTCGATGCATCAGACGAAGATGGTAAATTTGTGATCAAAGCCTCTCTTTGTTGCGAGGACCGAACTGATCTTTTGCAGGATCTCATAAAAACGTTAAAATCACTGCGTTTAAGAACAGTGAAAGCTGAAATAACGACACTTGGGGGAAGAATGAAGAACGTGTTGTTCGTCACTGGCGAAGCAGATTCAGTTAGCGACGGCGAGCAAATACAACAGCAATACTGTATAAGCTCGATTCAAGAAGCTCTTAAGGCAGTGATGGAGAAGGCCAGTGGAGATCATCATGAGTCTTCTTCTGGAAATGTTAAAAGACAAAGGACGAACAAGATTAATATCCTTTAA 969 43.14 MQGFPDQYLIQHQQQIFQHEQEKSDVYGGGRELIFPEVSPVLRPWSLPQVHPFNPAHFAPTPVRDHNTFQSPPSNSYDDFFNRRAHALQFAYEVPSFDHLRILSNSLGQQIETGSGSFGLQSELGKMTAQEIMDAKALAASKSHSEAERRRRERINNHLAKLRSLLPNTTKTDKASLLAEVIQHVKELKRETSLTAETSPVPTEMDELTVDASDEDGKFVIKASLCCEDRTDLLQDLIKTLKSLRLRTVKAEITTLGGRMKNVLFVTGEADSVSDGEQIQQQYCISSIQEALKAVMEKASGDHHESSSGNVKRQRTNKINIL 322
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 23659959 23661631 - Bpe010107.1 Bpe02g02290 100439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe02g02290 322 Gene3D - 134 196 IPR036638 GO:0046983
Bpe02g02290 322 PANTHER TRANSCRIPTION FACTOR BHLH30 57 322 IPR045847 GO:0003700|GO:0006355
Bpe02g02290 322 MobiDBLite consensus disorder prediction 297 311 - -
Bpe02g02290 322 Pfam Helix-loop-helix DNA-binding domain 142 188 IPR011598 GO:0046983
Bpe02g02290 322 CDD bHLH_AtAIG1_like 134 212 - -
Bpe02g02290 322 PANTHER TRANSCRIPTION FACTOR BHLH30 57 322 - -
Bpe02g02290 322 MobiDBLite consensus disorder prediction 297 322 - -
Bpe02g02290 322 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 139 188 IPR011598 GO:0046983
Bpe02g02290 322 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 143 194 IPR036638 GO:0046983
Bpe02g02290 322 SMART finulus 145 194 IPR011598 GO:0046983
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe02g02290 Bpe13g01328 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g01151 Bpe-Chr2:15119063 Bpe02g02290 Bpe-Chr2:23659959 5.21E-38 dispersed
Bpe02g02290 Bpe-Chr2:23659959 Bpe04g00598 Bpe-Chr4:3813447 1.11E-45 dispersed
Bpe10g00926 Bpe-Chr10:14860690 Bpe02g02290 Bpe-Chr2:23659959 9.39E-118 wgd
Bpe13g01328 Bpe-Chr13:18472475 Bpe02g02290 Bpe-Chr2:23659959 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
21051 PF00010 HLH 2.10E-12 No_clan Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe02g02290 - - jre:108993280 447.203