Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bpe02g02290 | ATGCAAGGGTTTCCAGACCAGTATCTGATTCAACATCAACAGCAGATTTTTCAACACGAGCAAGAAAAGAGCGATGTGTACGGAGGAGGAAGAGAATTGATTTTCCCTGAAGTTTCACCGGTTTTACGCCCATGGTCGCTACCTCAAGTTCATCCCTTTAATCCGGCCCACTTTGCTCCAACTCCGGTTCGAGATCACAACACGTTTCAATCCCCTCCTTCGAACTCATATGATGATTTTTTCAACCGAAGAGCTCATGCTCTTCAGTTTGCATACGAAGTTCCGTCCTTCGACCACCTCAGAATCCTATCAAACTCTCTTGGACAACAGATTGAAACTGGTTCGGGATCTTTTGGTCTGCAATCGGAACTGGGGAAGATGACTGCTCAAGAAATAATGGACGCTAAGGCTCTCGCTGCTTCAAAAAGCCATAGTGAGGCTGAGAGAAGAAGAAGAGAGAGAATCAACAACCATCTTGCTAAATTGCGCAGTTTACTACCCAACACCACTAAAACAGATAAAGCTTCATTACTAGCAGAAGTAATACAACACGTTAAAGAACTTAAACGAGAGACTTCTTTGACAGCAGAAACAAGTCCAGTTCCGACGGAAATGGATGAACTGACAGTCGATGCATCAGACGAAGATGGTAAATTTGTGATCAAAGCCTCTCTTTGTTGCGAGGACCGAACTGATCTTTTGCAGGATCTCATAAAAACGTTAAAATCACTGCGTTTAAGAACAGTGAAAGCTGAAATAACGACACTTGGGGGAAGAATGAAGAACGTGTTGTTCGTCACTGGCGAAGCAGATTCAGTTAGCGACGGCGAGCAAATACAACAGCAATACTGTATAAGCTCGATTCAAGAAGCTCTTAAGGCAGTGATGGAGAAGGCCAGTGGAGATCATCATGAGTCTTCTTCTGGAAATGTTAAAAGACAAAGGACGAACAAGATTAATATCCTTTAA | 969 | 43.14 | MQGFPDQYLIQHQQQIFQHEQEKSDVYGGGRELIFPEVSPVLRPWSLPQVHPFNPAHFAPTPVRDHNTFQSPPSNSYDDFFNRRAHALQFAYEVPSFDHLRILSNSLGQQIETGSGSFGLQSELGKMTAQEIMDAKALAASKSHSEAERRRRERINNHLAKLRSLLPNTTKTDKASLLAEVIQHVKELKRETSLTAETSPVPTEMDELTVDASDEDGKFVIKASLCCEDRTDLLQDLIKTLKSLRLRTVKAEITTLGGRMKNVLFVTGEADSVSDGEQIQQQYCISSIQEALKAVMEKASGDHHESSSGNVKRQRTNKINIL | 322 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 23659959 | 23661631 | - | Bpe010107.1 | Bpe02g02290 | 100439 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bpe02g02290 | 322 | Gene3D | - | 134 | 196 | IPR036638 | GO:0046983 | |
Bpe02g02290 | 322 | PANTHER | TRANSCRIPTION FACTOR BHLH30 | 57 | 322 | IPR045847 | GO:0003700|GO:0006355 | |
Bpe02g02290 | 322 | MobiDBLite | consensus disorder prediction | 297 | 311 | - | - | |
Bpe02g02290 | 322 | Pfam | Helix-loop-helix DNA-binding domain | 142 | 188 | IPR011598 | GO:0046983 | |
Bpe02g02290 | 322 | CDD | bHLH_AtAIG1_like | 134 | 212 | - | - | |
Bpe02g02290 | 322 | PANTHER | TRANSCRIPTION FACTOR BHLH30 | 57 | 322 | - | - | |
Bpe02g02290 | 322 | MobiDBLite | consensus disorder prediction | 297 | 322 | - | - | |
Bpe02g02290 | 322 | ProSiteProfiles | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 139 | 188 | IPR011598 | GO:0046983 | |
Bpe02g02290 | 322 | SUPERFAMILY | HLH, helix-loop-helix DNA-binding domain | 143 | 194 | IPR036638 | GO:0046983 | |
Bpe02g02290 | 322 | SMART | finulus | 145 | 194 | IPR011598 | GO:0046983 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Bpe02g02290 | Bpe13g01328 | CCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bpe02g01151 | Bpe-Chr2:15119063 | Bpe02g02290 | Bpe-Chr2:23659959 | 5.21E-38 | dispersed | |
Bpe02g02290 | Bpe-Chr2:23659959 | Bpe04g00598 | Bpe-Chr4:3813447 | 1.11E-45 | dispersed | |
Bpe10g00926 | Bpe-Chr10:14860690 | Bpe02g02290 | Bpe-Chr2:23659959 | 9.39E-118 | wgd | |
Bpe13g01328 | Bpe-Chr13:18472475 | Bpe02g02290 | Bpe-Chr2:23659959 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
21051 | PF00010 | HLH | 2.10E-12 | No_clan | Bpe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bpe02g02290 | - | - | jre:108993280 | 447.203 |