Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe02g02301 ATGGATTTAGGTGGGAAGGACGATTATGAACTAGAAAACAGGACTGAGAATTCTGTCAACTGTTCCCCAACTATGTCCTCTGGCTGGCGATTTAGTGGAGCCCAGCTCTTGAAAACGTCAATGGGGTTGGTTAACCCCGCAAATTCCTCTGGGAAAGAGGATCTAATTTTTCCTTCATGTTCATCTGCTTCGGTGGTGGATTATTTTGGTCCAAACTTCAATGGTGGATTTTTTGATATCTACAGTAACGTTAGTTCTTCAAACCCTTTTGGAATTAGCAGAGATAGTGCAGGTTCAATGAGAAGAACTTCTGATAGAACTCTTGATATGAGTTGGAACCCACCAAATCAAACGAGAGGAAGTAATTTACCCGTTTTTACTCACCCGAGCTTACCTCAATTTCCGGCTGATTCTGCATTCATCGAGCGGGCAGCTAGATTATCCTGCTTCAATGGCGGGAATCTTATGGAAATAGCTAGTCCTTTCGGTGTTCCTCAATCCATGGCTCTTTATTCTTGGAGTTCAGGGACAAATTCGGGCAATCAAGAAATTAACTGCATTGATGGGATGAGATTAGCTACTGTGGGGCAACCTCAAAAACAAGAGATTAGTGATATAGGAGAAGCCTCCATGGACGTTTGTTTGGAGCATGGATCTGAGAGTCCTGAGAATGATGGAAAAAATGAGAACCTTCTCAGATCTTACAATGAAGAAAAACGCACTTTCGGCGGGTCAGGTGGTGAATCAGAAGACGAGATGAGTGGTGGTGCTCAAGATGAGCCGTCGACGGCAGAGGGTAGAGAAGAAGAACCTTCTGGCAAGGGAATCGGACCCAAAAAAAGGAAGAGGGTTAGGCAGAACACAGGACTTGATCAAGCTAAAGATGGCCAATCTGCCAAGGATGATAAGGAGATTGAACGGAAGGACGATCAAAACCCATGTCGAGTTGCCAACAAATCTACTGGAAAACACAGTAAACAAGGAACTCAAGCATCCGATCTGCCAAAGGAAGAATATATTCACGTTAGAGCACGAAGAGGCCAGGCAACAAACAGCCACAGTCTTGCCGAAAGGGTTAGAAGGGAGAAGATCAGTGAAAGGATGAAGTTTCTTCAAGATCTTGTTCCGGGTTGCAGCAAGGTCACTGGCAAGGCGGTGATGCTAGACGAAATAATAAATTACGTACAGTCGCTCCAACGACAAGTAGAATTTTTATCGATGAAACTTGCCACTGTCAATCCGAGGATGGATTTCAATATTGATGGGCTTGCCAAAGATATTCTTCAAGCAAGGGCTGGTTCATCATCTTCATTGGGCTATTCTCCAGACATATCTATGGCTTATCCTCCATTACAACCCTCTCAACACGGACTTCTTTCCTCGGGTGTTCACTGCATCTGGAGCTCTTCCCAGATTCTACGGAGATCGCTTTCTTCCCACTTGATGACGCCGATGACAGGTGGATTTAAGGAGCCCTCTCAGCTACCAAATGGGTGGGAGGATGAGCTCCACCATGTTTTCCAAATGAGCCATGCAACTGCTGCTGCTTCGAATAGCCAAAGTGTTGATGGTAAAATCTCTAGTTAG 1587 44.86 MDLGGKDDYELENRTENSVNCSPTMSSGWRFSGAQLLKTSMGLVNPANSSGKEDLIFPSCSSASVVDYFGPNFNGGFFDIYSNVSSSNPFGISRDSAGSMRRTSDRTLDMSWNPPNQTRGSNLPVFTHPSLPQFPADSAFIERAARLSCFNGGNLMEIASPFGVPQSMALYSWSSGTNSGNQEINCIDGMRLATVGQPQKQEISDIGEASMDVCLEHGSESPENDGKNENLLRSYNEEKRTFGGSGGESEDEMSGGAQDEPSTAEGREEEPSGKGIGPKKRKRVRQNTGLDQAKDGQSAKDDKEIERKDDQNPCRVANKSTGKHSKQGTQASDLPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDFNIDGLAKDILQARAGSSSSLGYSPDISMAYPPLQPSQHGLLSSGVHCIWSSSQILRRSLSSHLMTPMTGGFKEPSQLPNGWEDELHHVFQMSHATAAASNSQSVDGKISS 528
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 23717586 23719702 + Bpe010118.1 Bpe02g02301 100450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe02g02301 528 MobiDBLite consensus disorder prediction 284 314 - -
Bpe02g02301 528 Pfam Helix-loop-helix DNA-binding domain 351 399 IPR011598 GO:0046983
Bpe02g02301 528 MobiDBLite consensus disorder prediction 315 329 - -
Bpe02g02301 528 MobiDBLite consensus disorder prediction 239 332 - -
Bpe02g02301 528 SMART finulus 354 404 IPR011598 GO:0046983
Bpe02g02301 528 Gene3D - 345 417 IPR036638 GO:0046983
Bpe02g02301 528 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 45 527 IPR024097 GO:0006355
Bpe02g02301 528 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 346 417 IPR036638 GO:0046983
Bpe02g02301 528 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 348 398 IPR011598 GO:0046983
Bpe02g02301 528 MobiDBLite consensus disorder prediction 1 22 - -
Bpe02g02301 528 MobiDBLite consensus disorder prediction 262 277 - -
Bpe02g02301 528 CDD bHLH_AtBPE_like 338 423 - -
Bpe02g02301 528 PANTHER TRANSCRIPTION FACTOR BHLH49 45 527 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe02g02301 Bpe13g01361 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g02301 Bpe-Chr2:23717586 Bpe13g00756 Bpe-Chr13:14089584 3.61E-62 dispersed
Bpe07g01037 Bpe-Chr7:15889390 Bpe02g02301 Bpe-Chr2:23717586 4.42E-31 transposed
Bpe15g00525 Bpe-Chr15:16408181 Bpe02g02301 Bpe-Chr2:23717586 2.47E-36 transposed
Bpe02g00466 Bpe-Chr2:3028853 Bpe02g02301 Bpe-Chr2:23717586 1.22E-49 transposed
Bpe13g01361 Bpe-Chr13:18848862 Bpe02g02301 Bpe-Chr2:23717586 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
21052 PF00010 HLH 6.70E-06 No_clan Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe02g02301 - - zju:107429134 551.977