Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bpe02g02301 | ATGGATTTAGGTGGGAAGGACGATTATGAACTAGAAAACAGGACTGAGAATTCTGTCAACTGTTCCCCAACTATGTCCTCTGGCTGGCGATTTAGTGGAGCCCAGCTCTTGAAAACGTCAATGGGGTTGGTTAACCCCGCAAATTCCTCTGGGAAAGAGGATCTAATTTTTCCTTCATGTTCATCTGCTTCGGTGGTGGATTATTTTGGTCCAAACTTCAATGGTGGATTTTTTGATATCTACAGTAACGTTAGTTCTTCAAACCCTTTTGGAATTAGCAGAGATAGTGCAGGTTCAATGAGAAGAACTTCTGATAGAACTCTTGATATGAGTTGGAACCCACCAAATCAAACGAGAGGAAGTAATTTACCCGTTTTTACTCACCCGAGCTTACCTCAATTTCCGGCTGATTCTGCATTCATCGAGCGGGCAGCTAGATTATCCTGCTTCAATGGCGGGAATCTTATGGAAATAGCTAGTCCTTTCGGTGTTCCTCAATCCATGGCTCTTTATTCTTGGAGTTCAGGGACAAATTCGGGCAATCAAGAAATTAACTGCATTGATGGGATGAGATTAGCTACTGTGGGGCAACCTCAAAAACAAGAGATTAGTGATATAGGAGAAGCCTCCATGGACGTTTGTTTGGAGCATGGATCTGAGAGTCCTGAGAATGATGGAAAAAATGAGAACCTTCTCAGATCTTACAATGAAGAAAAACGCACTTTCGGCGGGTCAGGTGGTGAATCAGAAGACGAGATGAGTGGTGGTGCTCAAGATGAGCCGTCGACGGCAGAGGGTAGAGAAGAAGAACCTTCTGGCAAGGGAATCGGACCCAAAAAAAGGAAGAGGGTTAGGCAGAACACAGGACTTGATCAAGCTAAAGATGGCCAATCTGCCAAGGATGATAAGGAGATTGAACGGAAGGACGATCAAAACCCATGTCGAGTTGCCAACAAATCTACTGGAAAACACAGTAAACAAGGAACTCAAGCATCCGATCTGCCAAAGGAAGAATATATTCACGTTAGAGCACGAAGAGGCCAGGCAACAAACAGCCACAGTCTTGCCGAAAGGGTTAGAAGGGAGAAGATCAGTGAAAGGATGAAGTTTCTTCAAGATCTTGTTCCGGGTTGCAGCAAGGTCACTGGCAAGGCGGTGATGCTAGACGAAATAATAAATTACGTACAGTCGCTCCAACGACAAGTAGAATTTTTATCGATGAAACTTGCCACTGTCAATCCGAGGATGGATTTCAATATTGATGGGCTTGCCAAAGATATTCTTCAAGCAAGGGCTGGTTCATCATCTTCATTGGGCTATTCTCCAGACATATCTATGGCTTATCCTCCATTACAACCCTCTCAACACGGACTTCTTTCCTCGGGTGTTCACTGCATCTGGAGCTCTTCCCAGATTCTACGGAGATCGCTTTCTTCCCACTTGATGACGCCGATGACAGGTGGATTTAAGGAGCCCTCTCAGCTACCAAATGGGTGGGAGGATGAGCTCCACCATGTTTTCCAAATGAGCCATGCAACTGCTGCTGCTTCGAATAGCCAAAGTGTTGATGGTAAAATCTCTAGTTAG | 1587 | 44.86 | MDLGGKDDYELENRTENSVNCSPTMSSGWRFSGAQLLKTSMGLVNPANSSGKEDLIFPSCSSASVVDYFGPNFNGGFFDIYSNVSSSNPFGISRDSAGSMRRTSDRTLDMSWNPPNQTRGSNLPVFTHPSLPQFPADSAFIERAARLSCFNGGNLMEIASPFGVPQSMALYSWSSGTNSGNQEINCIDGMRLATVGQPQKQEISDIGEASMDVCLEHGSESPENDGKNENLLRSYNEEKRTFGGSGGESEDEMSGGAQDEPSTAEGREEEPSGKGIGPKKRKRVRQNTGLDQAKDGQSAKDDKEIERKDDQNPCRVANKSTGKHSKQGTQASDLPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDFNIDGLAKDILQARAGSSSSLGYSPDISMAYPPLQPSQHGLLSSGVHCIWSSSQILRRSLSSHLMTPMTGGFKEPSQLPNGWEDELHHVFQMSHATAAASNSQSVDGKISS | 528 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 23717586 | 23719702 | + | Bpe010118.1 | Bpe02g02301 | 100450 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bpe02g02301 | 528 | MobiDBLite | consensus disorder prediction | 284 | 314 | - | - | |
Bpe02g02301 | 528 | Pfam | Helix-loop-helix DNA-binding domain | 351 | 399 | IPR011598 | GO:0046983 | |
Bpe02g02301 | 528 | MobiDBLite | consensus disorder prediction | 315 | 329 | - | - | |
Bpe02g02301 | 528 | MobiDBLite | consensus disorder prediction | 239 | 332 | - | - | |
Bpe02g02301 | 528 | SMART | finulus | 354 | 404 | IPR011598 | GO:0046983 | |
Bpe02g02301 | 528 | Gene3D | - | 345 | 417 | IPR036638 | GO:0046983 | |
Bpe02g02301 | 528 | PANTHER | STEROL REGULATORY ELEMENT-BINDING PROTEIN | 45 | 527 | IPR024097 | GO:0006355 | |
Bpe02g02301 | 528 | SUPERFAMILY | HLH, helix-loop-helix DNA-binding domain | 346 | 417 | IPR036638 | GO:0046983 | |
Bpe02g02301 | 528 | ProSiteProfiles | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 348 | 398 | IPR011598 | GO:0046983 | |
Bpe02g02301 | 528 | MobiDBLite | consensus disorder prediction | 1 | 22 | - | - | |
Bpe02g02301 | 528 | MobiDBLite | consensus disorder prediction | 262 | 277 | - | - | |
Bpe02g02301 | 528 | CDD | bHLH_AtBPE_like | 338 | 423 | - | - | |
Bpe02g02301 | 528 | PANTHER | TRANSCRIPTION FACTOR BHLH49 | 45 | 527 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Bpe02g02301 | Bpe13g01361 | CCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bpe02g02301 | Bpe-Chr2:23717586 | Bpe13g00756 | Bpe-Chr13:14089584 | 3.61E-62 | dispersed | |
Bpe07g01037 | Bpe-Chr7:15889390 | Bpe02g02301 | Bpe-Chr2:23717586 | 4.42E-31 | transposed | |
Bpe15g00525 | Bpe-Chr15:16408181 | Bpe02g02301 | Bpe-Chr2:23717586 | 2.47E-36 | transposed | |
Bpe02g00466 | Bpe-Chr2:3028853 | Bpe02g02301 | Bpe-Chr2:23717586 | 1.22E-49 | transposed | |
Bpe13g01361 | Bpe-Chr13:18848862 | Bpe02g02301 | Bpe-Chr2:23717586 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
21052 | PF00010 | HLH | 6.70E-06 | No_clan | Bpe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bpe02g02301 | - | - | zju:107429134 | 551.977 |