Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bpe02g02304 | ATGAGAGCAGGGAAATCGAATCAGGAAGAAGACGAGTTTGAGGAGGAAGACTTCATTTCCAACAAAGAAGGCCCTTCTTCGACTTCTATTTCTAACATTAGTAGCAACACCAAAGATGCTAAGAACAACGATAAGGCTAATGCAATACGGTCCAAGCATTCTGTTACAGAGCAGCGAAGACGAAGCAAGATCAACGAGAGGTTCCAGATGTTGAGAGATCTGATACCTCATAGTGATCAAAAGAGAGATACAGCATCTTTCCTTCTGGAGGTGATCGAGTATGTTCAGTATTTACAGGAAAAGGTGCAGAAGTATGAGGGTTCATGCCCGATCTGGAATGGAGAGCCTTCCAAATTAATGCCATGGAGAAATAGTCATTGGCGGGTCCAGAGTTTTGCCCGTCAATCATCTACCGTAAATAACGGTTCATTCCCGGGATTAACATTTCTGGGTAAAGTTGACGATAATAATATTCCGGTCCCTCAGAACCTGGAAGATTCCCTTGCGAACAGGGGCGTAGGTGATATTTCAAGTATAGGGGCCGCTTTGCAAGTTCCTATGCAGGTGAATGTCTCGTCTTCTGTCCGAAGCGATGGAATGGCTGCTCAGCCTCTTCAAATCCCGGCTTCTGATGCACCCTCAACTGACTGTCTAGTCACATCTGAGCCATTAAACCAGCCGGAGGAGGTGAATATAGAAGGCGGAACTATTAGAATTTCAAGTCCTTACTCAGAAGGGTTGCTAAATAACTTAACTCAAGCCCTCCAGGATGCTGGGGTGGATCTATCTCAGGCCAGCATCTCTATTCAGATCGCTATAGGAAAGAATGCAAACAAAGCACCACCTTTCAGAACATCTGTTTTTAAGGTATTGCTTTCAGAGTAA | 885 | 44.63 | MRAGKSNQEEDEFEEEDFISNKEGPSSTSISNISSNTKDAKNNDKANAIRSKHSVTEQRRRSKINERFQMLRDLIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEGSCPIWNGEPSKLMPWRNSHWRVQSFARQSSTVNNGSFPGLTFLGKVDDNNIPVPQNLEDSLANRGVGDISSIGAALQVPMQVNVSSSVRSDGMAAQPLQIPASDAPSTDCLVTSEPLNQPEEVNIEGGTIRISSPYSEGLLNNLTQALQDAGVDLSQASISIQIAIGKNANKAPPFRTSVFKVLLSE | 294 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 23736165 | 23738146 | + | Bpe010121.2 | Bpe02g02304 | 100453 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bpe02g02304 | 294 | SMART | finulus | 54 | 104 | IPR011598 | GO:0046983 | |
Bpe02g02304 | 294 | MobiDBLite | consensus disorder prediction | 43 | 63 | - | - | |
Bpe02g02304 | 294 | MobiDBLite | consensus disorder prediction | 1 | 63 | - | - | |
Bpe02g02304 | 294 | Pfam | Helix-loop-helix DNA-binding domain | 50 | 99 | IPR011598 | GO:0046983 | |
Bpe02g02304 | 294 | Gene3D | - | 46 | 110 | IPR036638 | GO:0046983 | |
Bpe02g02304 | 294 | ProSiteProfiles | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 48 | 98 | IPR011598 | GO:0046983 | |
Bpe02g02304 | 294 | CDD | bHLH_AtBIM_like | 47 | 123 | - | - | |
Bpe02g02304 | 294 | SUPERFAMILY | HLH, helix-loop-helix DNA-binding domain | 46 | 117 | IPR036638 | GO:0046983 | |
Bpe02g02304 | 294 | PANTHER | TRANSCRIPTION FACTOR BIM2 | 1 | 288 | - | - | |
Bpe02g02304 | 294 | MobiDBLite | consensus disorder prediction | 22 | 42 | - | - | |
Bpe02g02304 | 294 | PANTHER | BES1-INTERACTING MYC-LIKE PROTEIN | 1 | 288 | IPR044295 | GO:0003700|GO:0006351|GO:0046983 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bpe02g02304 | Bpe-Chr2:23736165 | Bpe03g00724 | Bpe-Chr3:27356221 | 4.04E-09 | dispersed | |
Bpe11g00039 | Bpe-Chr11:277454 | Bpe02g02304 | Bpe-Chr2:23736165 | 5.75E-50 | transposed | |
Bpe13g01369 | Bpe-Chr13:18949327 | Bpe02g02304 | Bpe-Chr2:23736165 | 2.89E-124 | transposed | |
Bpe02g02304 | Bpe-Chr2:23736165 | Bpe07g00745 | Bpe-Chr7:13981120 | 2.88E-55 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
21053 | PF00010 | HLH | 2.30E-13 | No_clan | Bpe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bpe02g02304 | - | - | csv:101217750 | 332.028 |