Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe02g02314 ATGAAATGTCATCTTCTCTCGGGAGCTCTTATTTTCTTAAGTTCCCTCTTTCTGGGTTGTGATTTTGGTTTTGTTTCAGCTGAAGTGGTTTCTGAGAAATCTGTTTTACTGGAGTTTAAGCGGTCTGTTTCCGATCCATCTGGAATTCTCTCAAGCTGGGATGGTAAAGACTCTGATTACTGTTCTTGGTACGGTATTTCCTGCGACTCCAATTTCAAGGTTTCCTCGCTGAATATTAGCGGGGTTACTGGTTTCGGAGGTAATTCTCAAACTTCTTCTAGTCCTTATTTTTCTCGGATTCAGTATCATAGATTTGGAAATGGAAGAATTTGTTCGCGTGGTGGAGCAAAATTAGTTGGTGGATTGCCATCGATAATTGGAAAACTTACTGAACTCAGGGTTGTATCACTTCCTTGTAATGATATCAGAGGTGAAATCCCTTCGGAAATTTTTGGTTTAGAAAAACTAATAGTGCTTGATCTTGAGGGAAATTCGCTCACAGGAAGATTGCCGGATCGATTCGATGGTTTAAGAACGTTGCGGGTTTGGAATCTTGCACTAAATTGGATTTATGGGGAAATTCCTTTTTCAATTTCGAAATGTGTGGATCTGGAAGTTCTAAATTTAGCTGCTAATAGACTCAACGGGTCAGTGCCTTCATTTTTGGGCAATTTTCCAAAGTTAAAGAGGCTTTATTTGTCACAAAATAGGTTAAGCGGATACTTTCCAGCTGGGTTTTCGAAGAGTTGTTCGAGTCTCGAGTACCTTGATTTGTCGGGAAATTTTCTAGCTGGTAGTATACCAAGTTGGCTGGGCAAGTGTAAGCACTTAAAGGAACTTTTGTTGTTTTCCAATAAGTTGAAAGGTGCCATTCCTAATGAGCTAGGACAGCTTCAGATGCTTGAAGTTCTAGACGTTTCTCGAAACAGTCTCAGCGGCTTAATCCCAGTGGATCTCAGGCAATGCTTAAAATTATCTGTTCTTGTCATCTCCAATCTTTTTAATCCATACACTTATCATAATTCCGTCGAGCACAATTATTTTGAAGGCTCTATTCCTGAAGCAGTTGCTAGTCTTCCAAAGTTAAGGATAGTTTGGGCTCCGAGGGCAAATCTAGAAGGGGAGCTTCCGAGCGAATGGGGTGATTGTGAGAATATGGAAATGCTTAACTTAGCTCAGAATCGTTTAAGAGGGGAAATATTTGATGTATTTCGGCAGTGTAAGAAGTTAGATTATCTTGATTTAAGTTCGAATAAGATTTCTGGCAAGCTGGATGAAGAACTTCATCAGGAAAGGCTCGTAAATGTTAGCTTTGATAAATTCACCAGTCGTATTCCAATGGAGTTGCATACAACTTACAGATCTCTTCGATTCTTGAATGTCTCTAATAATCAAATTTCCGGGTCCATTCCTCCGAGTCTATTCAGTTGGAAATCACTTGTTGTTCTTGACTGGAGTCGAAACATGATTGAAGGTCACATTCCTCCCGAGGTTGGTCTTCTGAAGCATCTAAAATATCTCTCCCTAGCAGGAAATAATCTGACGGGCGAGATTCCCTCAAGTTTCACATGGCTGAGCTCCCTCCAAGTGTTAGACCTCTCTTCAAATGAAATTTATGGGGAGATCCCCCAAGGTCTGGTGCACTTGACAAAATTAACAGCTCTATTGCTCAACAACAACAAACTTTCGGGGAAGATTCCTTCGGGTTTGTTTCGGCCAACACTATCTTCATTTGACGTATCATTCACTAACCTTTCTGGTTCTTCTCTGTCAAAAAACGACTCGATTGACCTCACTTGTGTTCCTGGCAAGCATTGCTTCTTTTATCCCCATTTTGTTTCCCTGGCTGCATCATCTGAAGATGTGCTGAATGTCAGCGGAAACTCAGGAACTAATCAATCGGCTGTGTCGGAGAGTGTCAGTGCCACTCCAAATAATGGCCTGAATTCTATTGAAATTGCAGCTATAGTATCTGCATCAGTAGTTGCTTCAGTTTTCTTAGCTCTGCTTATCCTCTTCTTTTATACAAGAAAACGGGTCCCACATTCAAGGGTTCGGATATCTGAATCAAGAGAAATAACAGTTTTCATCGACATTGGAGCTCCATTGACATTCGAGGCAATCGTCAAAGCAACCGGAAATTTCAGTAATGCCAACTGTATTGGAAATGGAGGATTTGGAGCAACCTATAGGGCTGAAATTCATCCAGGAACCTTGATTGCAGTCAAAAAACTATCTGTTGGACGATGCCACGGCATTCAACAATTTGATGCAGAGATTAAGATTCTCGAAAAGTTGCGACACCCTAATCTTGTTACCTTGATAGGCTACCATGCCGGTGATTCTGAGATGTTACTCATCTATAATTACTTGCCGGGTGGTAATCTGGAGAAGTTCATAAAAGATCGATCAGCTAAAGCCATCAATTGGAAGATTCTTCACAAGATCGCTTTCGACATAGCCAAAGCACTCGCTTATCTACACGACCAGTGCGCTCCGAGGGTCCTTCACCGTGATGTCAAACCGAGTAACATATTGCTCGATAACGACTTAAATGCATATTTATCTGATTTCGGTTTATCGAGACTCTTGGGAACTTCCGAATCGCATGCAACGACTGGTGTGGCTGGAACATTTGGTTATGTGGCCCCGGAGTATGCTTTGACCTGTCGGCTATCCGAGAAAGCTGATGTTTACAGCTATGGTGTGGTTTTGCTTGAATTAATATCGGATAAAAGAGCATTGGATCCTTCCTTTTCGTCGCATGTAAATGGTTTCAATATTGTTTCGTGGGCCCGCATGCAGTTAGGACTAGGACGGGCAAAAGAAGTGTTCACTGTTGGGCTGTGGGATTCAACTCCGCACAACGATTTGGTCTTGATGCTTCACTTAGCCATCACATGTACGGATGAAACGCTCTCGACTAGGCCCACTATGAAGCAAGTTCTCCAAAGATTGAAGCAAATTCAACCTCTTGCTCCGTAG 2985 41.88 MKCHLLSGALIFLSSLFLGCDFGFVSAEVVSEKSVLLEFKRSVSDPSGILSSWDGKDSDYCSWYGISCDSNFKVSSLNISGVTGFGGNSQTSSSPYFSRIQYHRFGNGRICSRGGAKLVGGLPSIIGKLTELRVVSLPCNDIRGEIPSEIFGLEKLIVLDLEGNSLTGRLPDRFDGLRTLRVWNLALNWIYGEIPFSISKCVDLEVLNLAANRLNGSVPSFLGNFPKLKRLYLSQNRLSGYFPAGFSKSCSSLEYLDLSGNFLAGSIPSWLGKCKHLKELLLFSNKLKGAIPNELGQLQMLEVLDVSRNSLSGLIPVDLRQCLKLSVLVISNLFNPYTYHNSVEHNYFEGSIPEAVASLPKLRIVWAPRANLEGELPSEWGDCENMEMLNLAQNRLRGEIFDVFRQCKKLDYLDLSSNKISGKLDEELHQERLVNVSFDKFTSRIPMELHTTYRSLRFLNVSNNQISGSIPPSLFSWKSLVVLDWSRNMIEGHIPPEVGLLKHLKYLSLAGNNLTGEIPSSFTWLSSLQVLDLSSNEIYGEIPQGLVHLTKLTALLLNNNKLSGKIPSGLFRPTLSSFDVSFTNLSGSSLSKNDSIDLTCVPGKHCFFYPHFVSLAASSEDVLNVSGNSGTNQSAVSESVSATPNNGLNSIEIAAIVSASVVASVFLALLILFFYTRKRVPHSRVRISESREITVFIDIGAPLTFEAIVKATGNFSNANCIGNGGFGATYRAEIHPGTLIAVKKLSVGRCHGIQQFDAEIKILEKLRHPNLVTLIGYHAGDSEMLLIYNYLPGGNLEKFIKDRSAKAINWKILHKIAFDIAKALAYLHDQCAPRVLHRDVKPSNILLDNDLNAYLSDFGLSRLLGTSESHATTGVAGTFGYVAPEYALTCRLSEKADVYSYGVVLLELISDKRALDPSFSSHVNGFNIVSWARMQLGLGRAKEVFTVGLWDSTPHNDLVLMLHLAITCTDETLSTRPTMKQVLQRLKQIQPLAP 994
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 23803620 23806604 - Bpe010130.1 Bpe02g02314 100463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe02g02314 994 SMART LRR_typ_2 501 524 IPR003591 -
Bpe02g02314 994 SMART LRR_typ_2 525 548 IPR003591 -
Bpe02g02314 994 SMART LRR_typ_2 250 274 IPR003591 -
Bpe02g02314 994 SMART LRR_typ_2 153 176 IPR003591 -
Bpe02g02314 994 SMART LRR_typ_2 298 321 IPR003591 -
Bpe02g02314 994 SMART LRR_typ_2 225 248 IPR003591 -
Bpe02g02314 994 SMART LRR_typ_2 549 573 IPR003591 -
Bpe02g02314 994 SMART LRR_typ_2 453 477 IPR003591 -
Bpe02g02314 994 Gene3D Ribonuclease Inhibitor 429 492 IPR032675 -
Bpe02g02314 994 ProSiteProfiles Protein kinase domain profile. 715 993 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe02g02314 994 Pfam Protein kinase domain 718 984 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe02g02314 994 Pfam Leucine Rich Repeat 155 177 IPR001611 GO:0005515
Bpe02g02314 994 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE RPK2 432 990 - -
Bpe02g02314 994 PRINTS Leucine-rich repeat signature 301 314 - -
Bpe02g02314 994 PRINTS Leucine-rich repeat signature 525 538 - -
Bpe02g02314 994 ProSiteProfiles Leucine-rich repeat profile. 455 477 IPR001611 GO:0005515
Bpe02g02314 994 CDD STKc_IRAK 721 989 - -
Bpe02g02314 994 SUPERFAMILY L domain-like 250 575 - -
Bpe02g02314 994 SMART serkin_6 715 993 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe02g02314 994 Gene3D Ribonuclease Inhibitor 111 428 IPR032675 -
Bpe02g02314 994 SUPERFAMILY Protein kinase-like (PK-like) 693 987 IPR011009 -
Bpe02g02314 994 Gene3D Transferase(Phosphotransferase) domain 1 791 991 - -
Bpe02g02314 994 Gene3D Ribonuclease Inhibitor 26 110 IPR032675 -
Bpe02g02314 994 SUPERFAMILY L domain-like 29 333 - -
Bpe02g02314 994 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 432 990 - -
Bpe02g02314 994 Pfam Leucine rich repeat N-terminal domain 32 69 IPR013210 -
Bpe02g02314 994 ProSitePatterns Serine/Threonine protein kinases active-site signature. 835 847 IPR008271 GO:0004672|GO:0006468
Bpe02g02314 994 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 10 424 - -
Bpe02g02314 994 Gene3D Ribonuclease Inhibitor 493 603 IPR032675 -
Bpe02g02314 994 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 20 - -
Bpe02g02314 994 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE RPK2 10 424 - -
Bpe02g02314 994 Gene3D Phosphorylase Kinase; domain 1 678 790 - -
Bpe02g02314 994 SMART LRR_sd22_2 407 430 - -
Bpe02g02314 994 SMART LRR_sd22_2 298 319 - -
Bpe02g02314 994 SMART LRR_sd22_2 525 548 - -
Bpe02g02314 994 SMART LRR_sd22_2 225 258 - -
Bpe02g02314 994 Pfam Leucine rich repeat 204 261 IPR001611 GO:0005515
Bpe02g02314 994 Pfam Leucine rich repeat 503 562 IPR001611 GO:0005515
Bpe02g02314 994 ProSitePatterns Protein kinases ATP-binding region signature. 721 744 IPR017441 GO:0005524
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g02314 Bpe-Chr2:23803620 Bpe11g01426 Bpe-Chr11:10605800 1.18E-13 dispersed
Bpe02g02314 Bpe-Chr2:23803620 Bpe11g00052 Bpe-Chr11:392517 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63215 PF00069 Pkinase 2.90E-44 CL0016 Bpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe02g02314 - - sind:105179820 861.677