Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe02g02316 ATGGAGGTTTTACTCTGTTTGGTGTTTCTACTGGCCGCTATCACTGGTCGCTCTGGTGCGACTTACTGTTTATGCAAAGATGGGCTGAGCGACTCAGCGCTTCAAACGACACTAGATTACGCCTGTGGAGCTGGAGCTGATTGCTCTCCGATTCTCCAAAACGGAGCTTGTTATTTACCGAACACTGTCAAAGATCACTGCAGCTATGCAGCTAACAGCTATTACCAGAGGAAGAATCAGTCTGGAGCAACCTGCAATTTCACCGGAACTGCCTATTCTAGCCAAACACCTCCTAGTAGCGTAGCCTCTGGCTGTGTTTATCCTTCTAGCTCAAGCACTGCAGGGTCAACTCCGCCTCCACCCTCGTCGACGACGAACTCAAATACGACATACAACACGCCGCCGTACAGTACGGGAATAAGCCCCAGTGACAGCGGAAGTGGAAGCGGGAGAGAGACGATCAGCTTTTTCAACGCCGTGGCCACCTTATTATTCTGGTCATTCGGTCATCTAGTGTGGGGCTGA 525 50.86 MEVLLCLVFLLAAITGRSGATYCLCKDGLSDSALQTTLDYACGAGADCSPILQNGACYLPNTVKDHCSYAANSYYQRKNQSGATCNFTGTAYSSQTPPSSVASGCVYPSSSSTAGSTPPPPSSTTNSNTTYNTPPYSTGISPSDSGSGSGRETISFFNAVATLLFWSFGHLVWG 174
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 23819190 23820034 - Bpe010132.1 Bpe02g02316 100465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe02g02316 174 MobiDBLite consensus disorder prediction 111 146 - -
Bpe02g02316 174 Pfam X8 domain 22 91 IPR012946 -
Bpe02g02316 174 SMART X8_cls 21 107 IPR012946 -
Bpe02g02316 174 Gene3D - 18 116 - -
Bpe02g02316 174 PANTHER PLASMODESMATA CALLOSE-BINDING PROTEIN 4 3 141 - -
Bpe02g02316 174 PANTHER BETA-1,3 GLUCANASE 3 141 IPR044788 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g02316 Bpe-Chr2:23819190 Bpe13g00310 Bpe-Chr13:10974512 3.04E-35 dispersed
Bpe02g02316 Bpe-Chr2:23819190 Bpe07g00760 Bpe-Chr7:14108427 9.61E-41 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe02g02316 - - mdm:103402825 163.31