Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe02g02317 ACGACTTCCAAAATGGCTTTGCTTTCTCGAAACCGAAACCTATTGAGATCCTTAAACTTCAACAATGCTTCCCGCATGAAGACCATCACATCCTTCGCGTTTCTTTCGCAGGAAGCTCAGCTCGCTACTGAACCTCCGCACACATCGTCTACTCCGCTTCCTCCTAGTCCTTCATCTGGCAGTCCTCTCTACAACGAGAATTGGCGTAGCCCTATTCCTCACTCGTCGCTGACGCAGTCTATTATTCCGCTCGGATTCCTTAACCAGTCTACGAACTCTCGAATGCAAGCATTGTCGGAGACGCTGGATCTTCAAAGCTTGTTGAATGTCTTCGCTGATAGGGTGGCCTCGCAACGATGGGCTGAAATGAAGCAACTTTTTGAACTCTGGATTCGGTCTTTGGACAAAAATGGAAAACCAAATATACCGGATGTGAACCTGTATAACAATTATTTGAGGGCTAATTTGATGATTGGAGCGTCGGCGGGGGAGCTTCTGGATATGGTATCCCAAATGGAGGACTATGCTATCTCTCCGAACACAGCGTCTTATAATTTGGTTTTGAAGGCCATGTACCAATCTAAGGAGACTGATGCGGCTCAGAAATTGATTGAACGGATGCTGCAGACAGGAGAAGCCTCTATGCCCGATGATGAGTCATATGATTTGATGATTGGAATGCTATTTTCATCGGACGATATTGATACTGCATTGAAATACATTGACTTGACCTTAAAATCAGGTTCAATGCTGTCACTAAAGGTATTTACTGAATGTGTGCGGAGCTGTGTAAACAAGGGCAGGCTAGATATGCTGGTTTCCATAATTGATAGGTGCAAGAAAACTGTTCAGAATAAAGCTCTGTGTCCAAATTGGAATCTGTGCAATTATATTGCTGAAATTGCAATGCAAGAGGATAACAGTAAGTTAGCATTTCACGCCCTGGAGTTTATGGCCAGATGGATAGCTCGTGGTGAGAATGCAAGGCCCCCTGTTTATCTTTCTGTAGATGAAGGATTGGTTGTTTCAGCACTTGGAACTGCTTGTAGAACCTACAGTTCTACTCTTGTGGATGCATCATGGGCAATCCTAAAGCGTTCATTGCGTCAAAAGAAGGCTCCTAATCCAGAATCTTATCTTGGGAAAATACATGCCCTTGCATCGATTGGTAATCTGCAAAGGGCTTTCAGTACTCTCCATGAATTTGAAACTGCCTACGGAAATTCTGATGTAGACAAACAAGAAGATATGTTCTCTCCATTCACATGTTTGTACCCGTTGGTTTTAGCCTGCTCCAAAAAGGGTTTTGAGACTTTGGACTCCGTCTATTTCCAACTTGAGAACTTAAGCCGGGCAGATCCACCATACAAGTCTGTTGCAGCTTTAAATTGCATCGTTTTGGGCTGTGCAAATATATGGGACATTGATCGTGCTTACCAAACTTTTGAGGCCATTGAGTCCACTTTTGGATTGACTCCGAACATTCATTCATATAACGCTTTGATGTATGCATTTGGAAAGCTCAAGAAGACATTTGAAGCTTCTAGGGTTTTTGAACATGCATTGAGTTTGGGGGTTAAACCAAATGCAACTTCTTATTCATTGCTCGTGGATGCTCATCTCGTTAACAGAGACCAGAAGTCTGCTATCTCTGTGATTGATGATTTGATTTCTGCTGGTTTTGAGCCGTCAAAAGAAACATTGAAGAAGGTGAGAAGACGATGCATTCGAGAAATGGACTATGATAGTGATGATCGGATTGATTCCATGGCTAAAAAGTTGAAGTTTCGAATGGGTTCAGAGAATCGCAGGGATATGCTGTTCAATCTTGAGTACAGCACCAATTATGTCTCATAG 1857 42.92 TTSKMALLSRNRNLLRSLNFNNASRMKTITSFAFLSQEAQLATEPPHTSSTPLPPSPSSGSPLYNENWRSPIPHSSLTQSIIPLGFLNQSTNSRMQALSETLDLQSLLNVFADRVASQRWAEMKQLFELWIRSLDKNGKPNIPDVNLYNNYLRANLMIGASAGELLDMVSQMEDYAISPNTASYNLVLKAMYQSKETDAAQKLIERMLQTGEASMPDDESYDLMIGMLFSSDDIDTALKYIDLTLKSGSMLSLKVFTECVRSCVNKGRLDMLVSIIDRCKKTVQNKALCPNWNLCNYIAEIAMQEDNSKLAFHALEFMARWIARGENARPPVYLSVDEGLVVSALGTACRTYSSTLVDASWAILKRSLRQKKAPNPESYLGKIHALASIGNLQRAFSTLHEFETAYGNSDVDKQEDMFSPFTCLYPLVLACSKKGFETLDSVYFQLENLSRADPPYKSVAALNCIVLGCANIWDIDRAYQTFEAIESTFGLTPNIHSYNALMYAFGKLKKTFEASRVFEHALSLGVKPNATSYSLLVDAHLVNRDQKSAISVIDDLISAGFEPSKETLKKVRRRCIREMDYDSDDRIDSMAKKLKFRMGSENRRDMLFNLEYSTNYVS 618
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 23822915 23826313 + Bpe010133.1 Bpe02g02317 100466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe02g02317 618 Pfam Pentatricopeptide repeat domain 463 507 IPR002885 -
Bpe02g02317 618 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 180 214 IPR002885 -
Bpe02g02317 618 MobiDBLite consensus disorder prediction 41 65 - -
Bpe02g02317 618 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 529 563 IPR002885 -
Bpe02g02317 618 Gene3D Tetratricopeptide repeat domain 112 329 IPR011990 GO:0005515
Bpe02g02317 618 PANTHER OS07G0599000 PROTEIN 3 616 IPR044605 -
Bpe02g02317 618 Gene3D Tetratricopeptide repeat domain 427 603 IPR011990 GO:0005515
Bpe02g02317 618 TIGRFAM PPR: pentatricopeptide repeat domain 496 530 IPR002885 -
Bpe02g02317 618 Pfam PPR repeat 183 209 IPR002885 -
Bpe02g02317 618 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 494 528 IPR002885 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g02317 Bpe-Chr2:23822915 Bpe12g00061 Bpe-Chr12:451647 7.98E-13 dispersed
Bpe02g02317 Bpe-Chr2:23822915 Bpe06g00223 Bpe-Chr6:11692563 8.33E-07 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe02g02317 - - vvi:100249185 926.006