Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe02g02321 TTTTCAATTTGTGCTCAACATTTTTTAAAACTCTTCTTTTTTCTAATATCAGCGAATGTGTCGTGTAGGAGCAAGGTCCGTGAGAGGGGGCAAAAGCGGATCCGACAGCCAAGATTTGCGTTTCTGACCAAGAGTGAGGTCGATAATCTTGAAGATGGGTATAGATGGAGAAAATATGGACAGAAAGCTGTTAAAAACAGTCCGTTCCCAAGCAGGAGTTACTACCGGTGCACAAACAGCAAATGCACGGTGAAGAAAAGGGTTGAGCGTTCATCGGAAGATCCTACTATTGTGATAACCACATACGAAGGTCAACATTGCCATCACACTGTAGGATTATCTCGAAGTGGAGTCTTGAGACATTCTGCTTCCTTTGATGGTCAGTTTCCTCCTCACTTCCCCCAGTTTTATTACCCTGAAATTCAGCTTCCACCGGAGACTCCACTTAGTGTGCCACATTTACAGCCGGACAATCATCCGGCCGGAACAAATAATGTGATTTCAGATTCAATTTCACAGCCTATTCATCGTGATCAAGGATTGCTAGGCGACATTGTCCCGAGTGGAGTGCGTAAAAGA 579 44.21 FSICAQHFLKLFFFLISANVSCRSKVRERGQKRIRQPRFAFLTKSEVDNLEDGYRWRKYGQKAVKNSPFPSRSYYRCTNSKCTVKKRVERSSEDPTIVITTYEGQHCHHTVGLSRSGVLRHSASFDGQFPPHFPQFYYPEIQLPPETPLSVPHLQPDNHPAGTNNVISDSISQPIHRDQGLLGDIVPSGVRKR 193
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 23847237 23848170 - Bpe025215 Bpe02g02321 100470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe02g02321 193 Pfam WRKY DNA -binding domain 51 108 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bpe02g02321 193 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 24 117 IPR044810 GO:0003700
Bpe02g02321 193 Gene3D WRKY domain 37 104 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bpe02g02321 193 ProSiteProfiles WRKY domain profile. 45 111 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bpe02g02321 193 PANTHER OS03G0758000 PROTEIN 24 117 - -
Bpe02g02321 193 SMART WRKY_cls 50 110 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bpe02g02321 193 SUPERFAMILY WRKY DNA-binding domain 43 109 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g02321 Bpe-Chr2:23847237 Bpe14g01092 Bpe-Chr14:8150578 5.25E-45 dispersed
Bpe02g00858 Bpe-Chr2:6485216 Bpe02g02321 Bpe-Chr2:23847237 1.56E-25 transposed
Bpe13g00796 Bpe-Chr13:14336961 Bpe02g02321 Bpe-Chr2:23847237 2.47E-35 transposed
Bpe13g01381 Bpe-Chr13:19042579 Bpe02g02321 Bpe-Chr2:23847237 4.22E-99 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
21055 PF03106 WRKY 1.00E-23 CL0274 Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe02g02321 - - mcha:111004648 235.343