Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe03g00007 ATGGGGAACAGAGAAGGGAGGCAAAATCACCAGAATCTGGTGCCTCTGGCTTCATTGATCAGCAAAGAGTTGAGAAGCGAGAGGATGGAGAAGCCGACTGTAAAATATGGCAGTGCAGCTCAGTCTAGGAAAGGGGAGGACTATTTCCTCATTAAAATGGACTGCCTAAGAATCCCTGCAAATTCTTCATCCACCTTTTCTGTGTTTGCTGTATTTGATGGGCACAATGGAAAGGCTGCGGCAATTTATTCGAAGGAATATTTGTTGAATCACGTCTTAAGTGCCATTCCACGTGGTCTTGGTAGGGAAGAATGGCTTCGTGCTCTACGCCAGGCATTGGTTGATGGGTTTGTGAAAACCGACAAGGAGTTTCGGAGCAGAGGAGATACATCTGGCACAACAGCAACGTTTGTAATAATTGATGGGTGGACTGTAACGGTGGCATCCGTCGGTGATTCCCGCTGTATTTTAGATACACAAGGTGGCTCTGTCTCCACTTTGACTGTGGACCATAGATTTGAGGAAAACGAAGAAGAGAGGGAGCGTGTGGCCGAAAGTGGAGGCAAAGTTGGAAGACTTTGCATTGTTGGTGGAGTCGAGGTTGGACCTCTTCGATGTTGGCCAGGCGGTTTATGTCTTTCTCGGTCAATTGGAGATATGGACGTCGGAGAATACATTGTTCCTATTCCATATGTTAAACAAGTGAAGCTATCAAATGCCGGTGGACGACTTATAATTGCATCTGATGGCATCTGGGATGCGTTATCTTCAGAATCAGCTTCAATGTCCTGCCGTGGGTTGCCAGCTGAGCTCGCTGCTCGACAAGTCGTGAAGGAAGCATTAAGAACAAGAGGCTTAAAAGACGATACGACTTGCTTAGTGGTCGACATAATTCCGCCCAACAATTCAGCCCATCCTCCTCCCCCTCCTCCAAAAAATCGGAACAAGTGGGCAGCTTTATTGTTTTGGAGGAAGTCTCGTGATTCGGAAAACAAACTCTCGAACAATCTTTCTACAACGAGTACCGTGGAGGAACTATTTGAAGAAGGCTCCGCCATGCTTGCAGATAGGCTTGGAAATAATGATTCAACCGGACAATCCACATATGGGTTATTTGTGTGTGATGTATGCCAAGTAGACCTTGCAGCAAATGACGGCATCTCAGTGCATGCAGGCTCGATCTTCTCGATGAGTTCGAACCCATGGCAAGGACCATTTCTTTGTGCTGGCTGTCGAGACGAGAAAGAAGCCAATGAAGAGTCATAG 1266 46.84 MGNREGRQNHQNLVPLASLISKELRSERMEKPTVKYGSAAQSRKGEDYFLIKMDCLRIPANSSSTFSVFAVFDGHNGKAAAIYSKEYLLNHVLSAIPRGLGREEWLRALRQALVDGFVKTDKEFRSRGDTSGTTATFVIIDGWTVTVASVGDSRCILDTQGGSVSTLTVDHRFEENEEERERVAESGGKVGRLCIVGGVEVGPLRCWPGGLCLSRSIGDMDVGEYIVPIPYVKQVKLSNAGGRLIIASDGIWDALSSESASMSCRGLPAELAARQVVKEALRTRGLKDDTTCLVVDIIPPNNSAHPPPPPPKNRNKWAALLFWRKSRDSENKLSNNLSTTSTVEELFEEGSAMLADRLGNNDSTGQSTYGLFVCDVCQVDLAANDGISVHAGSIFSMSSNPWQGPFLCAGCRDEKEANEES 421
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 57203 59465 + Bpe011852.1 Bpe03g00007 100512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe03g00007 421 ProSiteProfiles PPM-type phosphatase domain profile. 28 297 IPR001932 -
Bpe03g00007 421 SMART PP2C_4 27 295 IPR001932 -
Bpe03g00007 421 Pfam Protein phosphatase 2C 61 282 IPR001932 -
Bpe03g00007 421 Gene3D - 33 303 IPR036457 -
Bpe03g00007 421 PANTHER ALPHABET, ISOFORM E-RELATED 4 417 - -
Bpe03g00007 421 SMART PP2C_SIG_2 51 297 IPR001932 -
Bpe03g00007 421 PANTHER PROTEIN PHOSPHATASE 2C 15-RELATED 4 417 - -
Bpe03g00007 421 SUPERFAMILY PP2C-like 41 297 IPR036457 -
Bpe03g00007 421 CDD PP2Cc 44 297 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe03g00007 Bpe-Chr3:57203 Bpe09g00573 Bpe-Chr9:14518416 0 dispersed
Bpe03g00007 Bpe-Chr3:57203 Bpe02g00524 Bpe-Chr2:3410677 1.99E-29 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe03g00007 - - tcc:18609180 652.514