Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe03g00008 ATGCCGACACCCACACATTTTGCTTTTCTCCTGCTCTTCCTTTATCTTTTGAAACTCCAACCAGCTTATTCCGACCCGGATGTGGACTCTCTACTGGCCTTCAAAAATTCCTCTGACGCAGCTCGACGGCTAACCTCGTGGAATGCTTCCACCCCTCATTGCTCCTGGATCGGAGTTTCCTGCCTCAAAACCCGGGTTTCCAGGCTAGTCCTCGAGAACATGAGCCTCCAGGGCTCTTTGCAGCCTCTTACTACTCTCTCTCGCCTCCGAGTTCTCAGCCTTAAGAGCAACCGTTTTTCAGGTCCAGTTCCCGATTTGTCTAACCTTACAGCTCTAAAGCTATTGTTTCTCTCTCATAACGAGTTTTCCAGACACTTTCCTCCGTCCTTAACCTCGCTTTCTCGGCTTTATCGTCTCGATCTGTCGTATAATAACTTCTCCGGTGAGATTCCGGCGACTGTCAACCTTTTGAAACACCTTCTAACTCTTCGTCTGGACGAGAACGGCTTCTCCGGTCCCATTCCCCTTCTCAATCTTCTAAATCTTCAGGACTTTAATGCGTCGGGGAACCGCCTATCCGGCCAAATACCAAGCACCTTATCCTCTTTTCCCGACACTGCTTTCGGTCAAAATCTTGGTCTGTGTGGTTCTCCACTACAGAAATGTACGAGCATTGACAGCGAACCAACGAGGCCCAGAGCCGAGGGAGCCATTGCCTCACCGGTGACGCCTTCAGGCAACCCGACCGTCTTGCCTTCCTCGCCGAGTTCGATTCCTACAGTGGAACCGATCAAACCGGCGAGTACAAATCATAATAGTTCGGGGAAGATAAGCACGGTGGCTCTCATCGCCATAATCGTGGGCGACGGTTTGGTGCTCGCCGTCGTGTCCCTACTCCTCTTCTGCTACTTCTGCAAAAAGAACGCTGCGAAAGGTGGTGGAAACGTCAAGGGGTCGAAGGTTCTTGAAACGACGGAGAGGATTGTATACTCATCGAGCCCGTACCCTGCTCAGTCGAGGGTGGAGAGGGGACGAATGGTGTTCTTCGAGGGGGTGAAGCGGTTCGAGCTCGAAGATTTACTCCGAGCGTCGGCGGAGATGCTGGGAAAAGGAGGGTGGGGGACGTCGTACAAGGCGATTCTGGAGGACGGAAACGTGGTAGCGGTGAAGAGGCTGAAGGATGCGGAGGTGGGAGGGAGGAAGGATTTCGAGCAGCAAATGGCGGTGCTGGGGAAGCTCAGGCATTCAAACATTGTGAGCTTGAGGGCCTTCTACTTCGCGAGGGAGGAGAAACTGTTGGTCTACGACTACATGCCCAACGGCAGCTTGTTCTGGCTTCTTCACGGTAACCGTGGGCCGGGGCGAACTCCTCTAGAATGGACCACGAGGCTGAAAATTGCAGCCGGTTCGGCTCGAGGACTGGCCTTTCTTCACAGCTCCAACTCTCTCAACCCCACCCACGGCAACATCAAGTCGTCCAACATTCTCCTCGACAAATACGGCAATGCCCGACTCTCCGATTTTGGATTGCCCATTTTTTCAGCCCCCGGAAGCGGGTCTTCGCGTTCCAACGGGTATCTCCCTCCGGAGGCTTCGGAAAGTAGAAAACCCAGCCAGAAATGGGACGTGTACTCGTACGGGGTTCTTCTCCTGGAGCTGCTGACAGGGAAGTGCCCATCAGCAGTGGATGCTGAGGTGGACCTGCCGAGGTGGGTCCAGTCCGTGGTGAGAGAGGAATGGACGGCGGAGGTGTTCGATCTGGAGCTGATGAGGTACAGGGACATTGAGGAGGAGATGGTGGCGCTGCTGCAGATTGCATTGGCATGCACCTCAGCTTTGCCAGATCAACGCCCCAAGATGAGCCACGTGGTGAAGCTGATTGAGGAGATTGGTGGCGCCCAGGAGTCACCATGGCAGGAACAGGAAGGCTCCGAGTCTGATGGACGTGGAGGCAGTGAATTGTTGCAGAAATTGTGA 1977 54.12 MPTPTHFAFLLLFLYLLKLQPAYSDPDVDSLLAFKNSSDAARRLTSWNASTPHCSWIGVSCLKTRVSRLVLENMSLQGSLQPLTTLSRLRVLSLKSNRFSGPVPDLSNLTALKLLFLSHNEFSRHFPPSLTSLSRLYRLDLSYNNFSGEIPATVNLLKHLLTLRLDENGFSGPIPLLNLLNLQDFNASGNRLSGQIPSTLSSFPDTAFGQNLGLCGSPLQKCTSIDSEPTRPRAEGAIASPVTPSGNPTVLPSSPSSIPTVEPIKPASTNHNSSGKISTVALIAIIVGDGLVLAVVSLLLFCYFCKKNAAKGGGNVKGSKVLETTERIVYSSSPYPAQSRVERGRMVFFEGVKRFELEDLLRASAEMLGKGGWGTSYKAILEDGNVVAVKRLKDAEVGGRKDFEQQMAVLGKLRHSNIVSLRAFYFAREEKLLVYDYMPNGSLFWLLHGNRGPGRTPLEWTTRLKIAAGSARGLAFLHSSNSLNPTHGNIKSSNILLDKYGNARLSDFGLPIFSAPGSGSSRSNGYLPPEASESRKPSQKWDVYSYGVLLLELLTGKCPSAVDAEVDLPRWVQSVVREEWTAEVFDLELMRYRDIEEEMVALLQIALACTSALPDQRPKMSHVVKLIEEIGGAQESPWQEQEGSESDGRGGSELLQKL 658
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 80431 82853 + Bpe011853.1 Bpe03g00008 100513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe03g00008 658 Pfam Leucine rich repeat N-terminal domain 25 61 IPR013210 -
Bpe03g00008 658 Gene3D Phosphorylase Kinase; domain 1 335 437 - -
Bpe03g00008 658 CDD STKc_IRAK 368 630 - -
Bpe03g00008 658 ProSiteProfiles Protein kinase domain profile. 362 639 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe03g00008 658 Pfam Protein kinase domain 366 624 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe03g00008 658 SUPERFAMILY Protein kinase-like (PK-like) 366 627 IPR011009 -
Bpe03g00008 658 PANTHER - 21 634 - -
Bpe03g00008 658 MobiDBLite consensus disorder prediction 237 258 - -
Bpe03g00008 658 MobiDBLite consensus disorder prediction 242 258 - -
Bpe03g00008 658 Gene3D Transferase(Phosphotransferase) domain 1 438 648 - -
Bpe03g00008 658 MobiDBLite consensus disorder prediction 634 658 - -
Bpe03g00008 658 Gene3D Ribonuclease Inhibitor 84 229 IPR032675 -
Bpe03g00008 658 Gene3D Ribonuclease Inhibitor 22 83 IPR032675 -
Bpe03g00008 658 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 21 634 - -
Bpe03g00008 658 SUPERFAMILY L domain-like 45 203 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe03g00008 Bpe-Chr3:80431 Bpe13g01075 Bpe-Chr13:16329234 8.37E-170 dispersed
Bpe09g00065 Bpe-Chr9:451682 Bpe03g00008 Bpe-Chr3:80431 9.08E-96 dispersed
Bpe03g00006 Bpe-Chr3:43856 Bpe03g00008 Bpe-Chr3:80431 4.13E-86 proximal
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63217 PF00069 Pkinase 2.90E-33 CL0016 Bpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe03g00008 - - tcc:18609189 857.44