Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe03g00025 ATGGCTGGCCTTGAAGAACTAAGGAAGAAGCTTGCACCATTATTTGATGCTGAAAAGGGTCTTTCTTTGGATTCATCTTTGGACCCTTCCGGTTCCTACACATTTTCAGATGGTGGAGCTGTTAACTTGTTGAGCAGATCATATGGAGTATACAATATTAACGAGTTTGGATTGCAAAAGTGCTCCTCTTGGCCTGCGGATGATACTGATCATAGTGAAAAGACATACCGATGTGCTTCGCATGAGATGAGAATATTTGGAGCAATCGGTAGTGGAGCTAGTAGTGTTGTGCAGAGAGCTATCCATATTCCCAGTCATAGAATTTTGGCTCTGAAAAAGATCAATATTTTTGAGAAGGATAAAAGGCAACAGCTTCTTACAGAGATAAGGACACTATGTGAAGCGCCATGTTACCAGGGTCTTGTAGAATTCCATGGAGCGTTTTATACTCCTGACTCTGGACAAATCAGTATAGCTTTGGAGTACATGGATGGAGGCTCGTTGGCAGACATATTACGTATGAAAAGGAAAATACCAGAGCCTGTCCTTTCTTCAATGTTCCAAAAGATTCTCCAGGGACTGAGGTACTTGCATGGAGTTAGATATTTAGTCCACAGAGATATAAAGCCAGCTAATTTGCTCATAAATCTCAAGGGTGAGCCAAAAATAACAGATTTTGGTATAAGTGCGGGATTAGAGAATTCAATGGCGATGTGCGCGACATTTGTTGGGACCGTCACATACATGTCACCTGAACGGATTCGAAATGAAAATTACTCCTATCCTGCTGACATCTGGAGCCTTGGACTTGCTCTCTTTGAGTGTGGTACTGGAGAATTCCCATATACTGCTACTGAAGGTCCAGTAAATCTCATGTTGCAGATTTTGGATGACCCGTCACCATCGCCACCAAACCACTGCTTTTCACCGGAGTTTTGCTCGTTTGTTGATTCTTGTTTGCAAAAGGATGCAGATGCTAGACCTACAGCCGAACAGTTGCTTGCACATCCATTTATCACAAAGTACGAGGATGCTCAAGTAGATTTGGCAGATTTTGTAAGAAGTGTGTTTGACCCGACACAGAGGTTGAAGGACTTGGCAGATATGCTGGCAATTCATTATTATTTGCTCTTTGATGGACCTGACGAGGTTTGGCATCACGCGCGAACCTTGTATGATGAACGATCAAATTTCAGTTTTGCAGAGAAACTCTACTTAGGCCCAAATGACATTTTCGAAACTCTGTCAAATATTCGAAGCACATTAGCGGGTGATTGGCCTCCTGAAAAGCTAGTGCATGTCGTTGAAAAGCTCCAGTGTCGAGCTCACGGAGCGGATGGAGTTGCTATTCGAGTATCCGGATCCTTTATCATCGGGAACCAGTTTCTAGTGTGTGGAGATGGAGTTCAAGTGGAGGGCTTACCCCATTTTAAAGATCTTGCTATCGATCTCGGCTCTCGCAGAATGGGGATGTTCCGCGAGCAGTTTATTATGGAGCCGAGCAGTGTGATTGGTCGATACGTTATTTCGAAACAAGAGCTGTATGTAACCCATCAGTAA 1560 43.46 MAGLEELRKKLAPLFDAEKGLSLDSSLDPSGSYTFSDGGAVNLLSRSYGVYNINEFGLQKCSSWPADDTDHSEKTYRCASHEMRIFGAIGSGASSVVQRAIHIPSHRILALKKINIFEKDKRQQLLTEIRTLCEAPCYQGLVEFHGAFYTPDSGQISIALEYMDGGSLADILRMKRKIPEPVLSSMFQKILQGLRYLHGVRYLVHRDIKPANLLINLKGEPKITDFGISAGLENSMAMCATFVGTVTYMSPERIRNENYSYPADIWSLGLALFECGTGEFPYTATEGPVNLMLQILDDPSPSPPNHCFSPEFCSFVDSCLQKDADARPTAEQLLAHPFITKYEDAQVDLADFVRSVFDPTQRLKDLADMLAIHYYLLFDGPDEVWHHARTLYDERSNFSFAEKLYLGPNDIFETLSNIRSTLAGDWPPEKLVHVVEKLQCRAHGADGVAIRVSGSFIIGNQFLVCGDGVQVEGLPHFKDLAIDLGSRRMGMFREQFIMEPSSVIGRYVISKQELYVTHQ 519
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 459401 463035 - Bpe011869.2 Bpe03g00025 100530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe03g00025 519 SUPERFAMILY NTF2-like 364 514 IPR032710 -
Bpe03g00025 519 Gene3D - 364 517 - -
Bpe03g00025 519 SMART serkin_6 83 339 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe03g00025 519 CDD PKc_MAPKK_plant_like 84 343 - -
Bpe03g00025 519 PANTHER - 2 517 - -
Bpe03g00025 519 ProSiteProfiles Nuclear transport factor 2 domain profile. 366 516 IPR018222 -
Bpe03g00025 519 Gene3D Transferase(Phosphotransferase) domain 1 165 363 - -
Bpe03g00025 519 Gene3D Phosphorylase Kinase; domain 1 59 164 - -
Bpe03g00025 519 ProSitePatterns Protein kinases ATP-binding region signature. 89 112 IPR017441 GO:0005524
Bpe03g00025 519 PANTHER DUAL SPECIFICITY MITOGEN-ACTIVATED PROTEIN KINASE KINASE 5-RELATED 2 517 - -
Bpe03g00025 519 Pfam Protein kinase domain 87 339 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe03g00025 519 SUPERFAMILY Protein kinase-like (PK-like) 85 356 IPR011009 -
Bpe03g00025 519 ProSiteProfiles Protein kinase domain profile. 83 339 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe03g00025 519 ProSitePatterns Serine/Threonine protein kinases active-site signature. 203 215 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe03g00025 Bpe-Chr3:459401 Bpe13g01246 Bpe-Chr13:17706733 1.44E-72 dispersed
Bpe03g00025 Bpe-Chr3:459401 Bpe01g00601 Bpe-Chr1:3948403 6.98E-73 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63219 PF00069 Pkinase 3.50E-59 CL0016 Bpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe03g00025 K20607 - csin:114272195 907.516