Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe03g00045 ATGTCTTCGGAAGCCTCGCCGACGTCCACGACGGCGCCGGAACCTCATGCGCCGCTACTCCGCCCTCGCCAGCCTTCTAGCTCCGAAGGTCCCAGCTCACCGGCCCGACCAGCCACCCTCGCTTTCCTACTTGGTCGAGCCACAGGTCACCGCGGTCCCTCCATGTTGGTCCGTGAGACAGCGGCTAGGCAGCTCGAGGAACGGCGAGCCGACTGGGGCTATTCCAAACCGGTGGTGGTGCTGGACATATTGTGGAACACGGCGTTTGTTGTTGTGACGGTTGCTATGTTGATTTGCACTAAGAACGAGCGCGCTTGCACGCCGATTCGGCTATGGATCTGTGGCTACGCTTTGCAGTGCGTGGTTCATGTGGTCCTTGTGTGGTTAGAGTACAGAAGGAGGACCGTTAGGCGAGTTAGGGATTCGGAGCGGGAGCAGCAGAGTGCAGATGCTGCGAATGAAAGCGAGAATGAGGATTCTGGAGAGAGGGGTTTGGCTAGTTTGAACCATGTCAACAAACGATGTGAATCAGTAAATACGATGGCATCATTTCTCTGGTGGATAGTTGGCTTCTATTGGGTTGTCTCTGGCGGTGATAATCTTCTGCAAAATGCTCCGCAGTTGTACTGGTTGGCTGTGGTCTTCCTGGCATTTGATGTGTTTTTTGCCGTCTTTTGTGTTGTTTTGGCATGTTTGATTGGGATTGCTCTTTGCTGCTGCTTGCCTTGCATCATTGCCGTACTCTATGCTGTTGCAGGGCAGGAAGGTGCATCAGAAGCAGATCTTGGCATCCTTCCAAAATACAGATTTCAAGCTTTCAATGAAGAAGAGAAGACCAATGTGGGGGCTGGTTTAATGGTTCCTGTTGAAACCAGCAGTGGATACTTAGCGACGGAGAAAACACTTTTACCTGAGGATGCAGAGTGTTGTATATGTTTGAGTTCATATGAGGATGGAGCAGAGCTGAATGCTCTTCCCTGCAGCCACCATTTCCACTCTGCATGCATCATAAAATGGCTGAAAATGAATGCAACATGTCCTCTCTGCAAATACAACATTCTCAAAGGCTGTGAACAGGTATAA 1083 50.97 MSSEASPTSTTAPEPHAPLLRPRQPSSSEGPSSPARPATLAFLLGRATGHRGPSMLVRETAARQLEERRADWGYSKPVVVLDILWNTAFVVVTVAMLICTKNERACTPIRLWICGYALQCVVHVVLVWLEYRRRTVRRVRDSEREQQSADAANESENEDSGERGLASLNHVNKRCESVNTMASFLWWIVGFYWVVSGGDNLLQNAPQLYWLAVVFLAFDVFFAVFCVVLACLIGIALCCCLPCIIAVLYAVAGQEGASEADLGILPKYRFQAFNEEEKTNVGAGLMVPVETSSGYLATEKTLLPEDAECCICLSSYEDGAELNALPCSHHFHSACIIKWLKMNATCPLCKYNILKGCEQV 360
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 726536 729901 - Bpe011887.1 Bpe03g00045 100550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe03g00045 360 PANTHER TARGET OF ERK KINASE MPK-1 14 357 - -
Bpe03g00045 360 SUPERFAMILY RING/U-box 297 354 - -
Bpe03g00045 360 MobiDBLite consensus disorder prediction 1 35 - -
Bpe03g00045 360 SMART ring_2 309 349 IPR001841 -
Bpe03g00045 360 Pfam Ring finger domain 308 350 IPR001841 -
Bpe03g00045 360 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 255 355 IPR013083 -
Bpe03g00045 360 PANTHER E3 UBIQUITIN PROTEIN LIGASE RIE1-LIKE 14 357 - -
Bpe03g00045 360 ProSiteProfiles Zinc finger RING-type profile. 309 350 IPR001841 -
Bpe03g00045 360 CDD RING-H2_PA-TM-RING 308 350 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g00063 Bpe-Chr2:487002 Bpe03g00045 Bpe-Chr3:726536 4.21E-87 dispersed
Bpe03g00045 Bpe-Chr3:726536 Bpe10g00999 Bpe-Chr10:15412528 0 dispersed
Bpe03g00045 Bpe-Chr3:726536 Bpe14g01000 Bpe-Chr14:7388684 3.01E-110 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe03g00045 - K13148 tcc:18609876 523.472