Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe03g00066 ATGCCCTACTTAACGGAACAATGGGGAGATTTGCCGTTTAAAGTTGACGATGAAGAGGACATGATCGTCTTTAACTCTCTCTACTATGCCTTTTCTCATGGATGGTCACCTCTGGATCCGACTATACCCTCCACCACCGTTAAGAAAGAGATTACGAAGGAAGAATCGGAGCCTGGTCCCAGGCGATACAGAGGGGTCAGAAGACGGCCGTGGGGGAAATTTGCTGCTGAGATAAGAGATTCGGCGAGGAACGGGGCGAGAGTCTGGCTCGGCACTTTTCAAACGGCTGAGTGTGCAGCTTTAGCTTATGATCGAGCCGCTTACCGAATGCGTGGCTCGAAAGCTTTGCTTAATTTTCCAAACCGCAGTTCGATTGACGAGCCAGAGCCGGAGAGAGTTAAGGGTAAGCGCAAAAACCCGGTGCCGGGCCCCGCGTCGAGGGCCGGCCGGAGAAGCTGCTCAGCTAAGAAAATCAAAGGCTTGCCGGAATCTACGAGTGAAATGGGAAGTTATCGAATGTGTATCAGTGCACCTATAAGATAG 543 51.38 MPYLTEQWGDLPFKVDDEEDMIVFNSLYYAFSHGWSPLDPTIPSTTVKKEITKEESEPGPRRYRGVRRRPWGKFAAEIRDSARNGARVWLGTFQTAECAALAYDRAAYRMRGSKALLNFPNRSSIDEPEPERVKGKRKNPVPGPASRAGRRSCSAKKIKGLPESTSEMGSYRMCISAPIR 180
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 1036893 1037435 - Bpe011908.1 Bpe03g00066 100571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe03g00066 180 Pfam AP2 domain 62 112 IPR001471 GO:0003700|GO:0006355
Bpe03g00066 180 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 1 5 138 - -
Bpe03g00066 180 PRINTS Ethylene responsive element binding protein signature 63 74 IPR001471 GO:0003700|GO:0006355
Bpe03g00066 180 PRINTS Ethylene responsive element binding protein signature 102 122 IPR001471 GO:0003700|GO:0006355
Bpe03g00066 180 SMART rav1_2 62 126 IPR001471 GO:0003700|GO:0006355
Bpe03g00066 180 CDD AP2 71 121 IPR001471 GO:0003700|GO:0006355
Bpe03g00066 180 SUPERFAMILY DNA-binding domain 62 121 IPR016177 GO:0003677
Bpe03g00066 180 ProSiteProfiles AP2/ERF domain profile. 62 120 IPR001471 GO:0003700|GO:0006355
Bpe03g00066 180 MobiDBLite consensus disorder prediction 120 161 - -
Bpe03g00066 180 Gene3D AP2/ERF domain 61 122 IPR036955 GO:0003700|GO:0006355
Bpe03g00066 180 PANTHER DNA-BINDING DOMAIN 5 138 IPR044808 GO:0003700|GO:0009873
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe03g00066 Bpe-Chr3:1036893 Bpe05g00559 Bpe-Chr5:19748914 1.48E-49 dispersed
Bpe03g00066 Bpe-Chr3:1036893 Bpe03g00368 Bpe-Chr3:9705570 1.31E-82 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
21065 PF00847 AP2 6.30E-13 CL0081 Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe03g00066 K09286 K13432 pvy:116146168 182.57