Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bpe03g00066 | ATGCCCTACTTAACGGAACAATGGGGAGATTTGCCGTTTAAAGTTGACGATGAAGAGGACATGATCGTCTTTAACTCTCTCTACTATGCCTTTTCTCATGGATGGTCACCTCTGGATCCGACTATACCCTCCACCACCGTTAAGAAAGAGATTACGAAGGAAGAATCGGAGCCTGGTCCCAGGCGATACAGAGGGGTCAGAAGACGGCCGTGGGGGAAATTTGCTGCTGAGATAAGAGATTCGGCGAGGAACGGGGCGAGAGTCTGGCTCGGCACTTTTCAAACGGCTGAGTGTGCAGCTTTAGCTTATGATCGAGCCGCTTACCGAATGCGTGGCTCGAAAGCTTTGCTTAATTTTCCAAACCGCAGTTCGATTGACGAGCCAGAGCCGGAGAGAGTTAAGGGTAAGCGCAAAAACCCGGTGCCGGGCCCCGCGTCGAGGGCCGGCCGGAGAAGCTGCTCAGCTAAGAAAATCAAAGGCTTGCCGGAATCTACGAGTGAAATGGGAAGTTATCGAATGTGTATCAGTGCACCTATAAGATAG | 543 | 51.38 | MPYLTEQWGDLPFKVDDEEDMIVFNSLYYAFSHGWSPLDPTIPSTTVKKEITKEESEPGPRRYRGVRRRPWGKFAAEIRDSARNGARVWLGTFQTAECAALAYDRAAYRMRGSKALLNFPNRSSIDEPEPERVKGKRKNPVPGPASRAGRRSCSAKKIKGLPESTSEMGSYRMCISAPIR | 180 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 1036893 | 1037435 | - | Bpe011908.1 | Bpe03g00066 | 100571 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bpe03g00066 | 180 | Pfam | AP2 domain | 62 | 112 | IPR001471 | GO:0003700|GO:0006355 | |
Bpe03g00066 | 180 | PANTHER | ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 1 | 5 | 138 | - | - | |
Bpe03g00066 | 180 | PRINTS | Ethylene responsive element binding protein signature | 63 | 74 | IPR001471 | GO:0003700|GO:0006355 | |
Bpe03g00066 | 180 | PRINTS | Ethylene responsive element binding protein signature | 102 | 122 | IPR001471 | GO:0003700|GO:0006355 | |
Bpe03g00066 | 180 | SMART | rav1_2 | 62 | 126 | IPR001471 | GO:0003700|GO:0006355 | |
Bpe03g00066 | 180 | CDD | AP2 | 71 | 121 | IPR001471 | GO:0003700|GO:0006355 | |
Bpe03g00066 | 180 | SUPERFAMILY | DNA-binding domain | 62 | 121 | IPR016177 | GO:0003677 | |
Bpe03g00066 | 180 | ProSiteProfiles | AP2/ERF domain profile. | 62 | 120 | IPR001471 | GO:0003700|GO:0006355 | |
Bpe03g00066 | 180 | MobiDBLite | consensus disorder prediction | 120 | 161 | - | - | |
Bpe03g00066 | 180 | Gene3D | AP2/ERF domain | 61 | 122 | IPR036955 | GO:0003700|GO:0006355 | |
Bpe03g00066 | 180 | PANTHER | DNA-BINDING DOMAIN | 5 | 138 | IPR044808 | GO:0003700|GO:0009873 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bpe03g00066 | Bpe-Chr3:1036893 | Bpe05g00559 | Bpe-Chr5:19748914 | 1.48E-49 | dispersed | |
Bpe03g00066 | Bpe-Chr3:1036893 | Bpe03g00368 | Bpe-Chr3:9705570 | 1.31E-82 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
21065 | PF00847 | AP2 | 6.30E-13 | CL0081 | Bpe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bpe03g00066 | K09286 | K13432 | pvy:116146168 | 182.57 |