Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe03g00133 CTGGCTCTGGAGAGCTATTTAGGCCCCGGCCACCAACGGCCAGTGCCCCCAATGGCGCCCTCACGGGTGGCTGGAGGGTTGGCACAATCTTCCTCCAGTTCAGGGATTTTCTTCCAGGCAGACGGGCAGTCCCAGACTGTTATTAATTCTCACTTGAGCTCATCTTTTGGAAACTCATCTGCTTCAATTCCTGGAACTGGAAGATCAGATTTGATTCCAGCTTCGGGAGACATGAATAATACAGTTTTAAATAGTGTGGCAAACTCAGGTCCAAGCGTCGGGGCAAGTTCTTTGGTTACAGATGCAAACTCTGCATTTTCAGGAGGCCCCCATCTGCAGAGAAGTGCTAGCATCAATAACGAGTCATACATGCGGTTGCCTGCATCGCCTTTGTCATTCTCGTCCAATAATCTCAGTATTTCAGGATCATCAGTTATGGATGGCTCTTCAGTGGTGCAGCAGAGTTCTCAACCGGACCATAATTCCCAGCAAATGCAGCATAACCAAATGCAGAACCAGCATGGTGCATCAAGTGCAACTTCATTGCCATCATCACAAACTGGCCAAGTTTCACTTCCTCTCGGTGCACGACTTTCTGGGTCTTTTGTTACGGATCCGAATAATTTTTCTCAGGCGCAGAAGAAACCTCGGTTGGACTCAAAGCAGGAAGATATTCTGCAACAGCAGGTGTTGCAACAGTTATTGCAGAGACAAGACTCGATGCAATTACAAGGCCGTAATCCACAACTGCAAGCGCTGTTACAGCAACAAAGATTTCGGCAACAACAGCAGATTTTGCAGACTATGCCACAGTTGCAGAGAGCTCAATTGCAGCAGCAGCAGATGCAGCTGAGACAGCAGCTGCAACAGCAGGCAGTGCAGCCAAGTTCTCCAATGAAACGTCCATATGATGGTGGTGTATGTTCACGTCGACTGATGCAATATTTATATCATCAACGGCAAAGGCCTCCGGACAATAGCATTGCCTATTGGAGGAAGTTTGTAACAGAGTATTACTCGCCTCGTGCGAAGAAAAGATGGTGCTTGTCATTGTATGATAATGTTGGTCATCATGCACTTGGTGTGTTTCCTCAGGCAGCTATGGATGCATGGCAATGTGACATCTGTGGATCTAAATCTGGAAGAGGATTTGAAGCTACTTATGAAGTACTTCCTAGACTAAACGAGATCAAATTTAGCAGTGGAGTCATCGATGAACTTTTATCTTTGGATTTACCACGTGAATGTAGATTTAATTCTGGAATTATGATGCTGGAGTATGGAAAAGCTGTCCAAGAGAGTGTATATGAGCAACTTCGTGTTGTTCGTGAGGGCCAGCTTCGTATCATATACACAAATGACTTGAAGATATTATCTTGGGAATTTTGTGCTCGACGCCATGAGGAACTGCTTCCTCGTAGGTTGGTGGCTCCACAGGTGAATCAGTTAGTTCAGGTTGCACAGAAATGCCAGAGTACAATCTCTGAAGGCGGATCTGATGGGCTGTCGCAGCAAGATTTGCAAGCTAACAGCAATATGGTACTGACGGCTGGGCGTCAACTGGCAAAGAGTCTGGAGTTGCAGTCCCTGAATGACTTGGGTTTCTCTAAAAGATATGTGAGGTGTTTGCAGATATCTGAAGTTGTCAACAGCATGAAAGATCTCGTGGATTTCTGCCGCGAGCACATAATTGGACCGATCGAGGGGTTGAAAAATTATCCTTGCCATGCCGCCGCAGCCAAACTCCAGGCTAAGAAAATGCAAGAGATGGAGCATTTAGCTAGCGTTCAGGGTCTGCCCACAGACCGAAACACCCTTAACAAGCTAATGGCAATGCATCCAAGCCTCAACAACCAAGTCAATAACAACCATCAAATGGTCAGCCGAGGAGCTTTGAGTGGCTCTGCCCAAGCTGCTTTGGCCCTCACTACATACCAAAACATCCTGATGAGACAGAACTCAATGAACTCGATTCCTAACCCACTTCAACAGGAGGCTTCATCTTCCTTCAACAATTCTAACCAGAGCCCATCTTCGAGCTTCCTAGGGAATGCCACTTTAATCTCGGGTTCTATGCAGAACTCTCCGGCCAGTGGCTTTTCCAGCCCGAATCTCCGAACACCGCAGTCTCAACCTACACAGGTGCTCACACAGAGGTCGCTGAGCTCTAATAGCCTCCTTCAACAAAGCCATCCTCAGGGCAATCAGGCTCTACAGCAGCAGATGATCCAGCAATTCTTACAGATGTCTAACGCTGGATCTGGGCAAAACCCAAGTGGTAATTTGATCAGAACTGGGCTGGGATATAGGGGAAGCCCTTCATTGTCGGCTCCGGCCACCAGTAATTTATTGGGAAATAACGGGCCTGGACCAGCTCCGAGCCGGAGCAGCAGTTTCAAAGCTGTTTCAAACAGTGACTCGCCTGCAGGAGGTGGAAATAACGGATTCAGTCAGAGGGCACCGGATTTGGCATCAAACCTTCATCTGCAGGAAGGTTTGCTTCCCGATATAGCCCACGATTTCTCGGATAATGCATTTTTAAACAGTGATTTTGATGATAGTATGGATTATGGGTGGAAGGCTTGA 2586 47.25 LALESYLGPGHQRPVPPMAPSRVAGGLAQSSSSSGIFFQADGQSQTVINSHLSSSFGNSSASIPGTGRSDLIPASGDMNNTVLNSVANSGPSVGASSLVTDANSAFSGGPHLQRSASINNESYMRLPASPLSFSSNNLSISGSSVMDGSSVVQQSSQPDHNSQQMQHNQMQNQHGASSATSLPSSQTGQVSLPLGARLSGSFVTDPNNFSQAQKKPRLDSKQEDILQQQVLQQLLQRQDSMQLQGRNPQLQALLQQQRFRQQQQILQTMPQLQRAQLQQQQMQLRQQLQQQAVQPSSPMKRPYDGGVCSRRLMQYLYHQRQRPPDNSIAYWRKFVTEYYSPRAKKRWCLSLYDNVGHHALGVFPQAAMDAWQCDICGSKSGRGFEATYEVLPRLNEIKFSSGVIDELLSLDLPRECRFNSGIMMLEYGKAVQESVYEQLRVVREGQLRIIYTNDLKILSWEFCARRHEELLPRRLVAPQVNQLVQVAQKCQSTISEGGSDGLSQQDLQANSNMVLTAGRQLAKSLELQSLNDLGFSKRYVRCLQISEVVNSMKDLVDFCREHIIGPIEGLKNYPCHAAAAKLQAKKMQEMEHLASVQGLPTDRNTLNKLMAMHPSLNNQVNNNHQMVSRGALSGSAQAALALTTYQNILMRQNSMNSIPNPLQQEASSSFNNSNQSPSSSFLGNATLISGSMQNSPASGFSSPNLRTPQSQPTQVLTQRSLSSNSLLQQSHPQGNQALQQQMIQQFLQMSNAGSGQNPSGNLIRTGLGYRGSPSLSAPATSNLLGNNGPGPAPSRSSSFKAVSNSDSPAGGGNNGFSQRAPDLASNLHLQEGLLPDIAHDFSDNAFLNSDFDDSMDYGWKA 861
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 1877849 1882878 + Bpe011978.1 Bpe03g00133 100638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe03g00133 861 Coils Coil 274 294 - -
Bpe03g00133 861 PANTHER LIM-DOMAIN BINDING PROTEIN/SEUSS-RELATED 22 168 - -
Bpe03g00133 861 PANTHER LIM DOMAIN-BINDING PROTEIN 22 168 IPR029005 -
Bpe03g00133 861 MobiDBLite consensus disorder prediction 55 74 - -
Bpe03g00133 861 Pfam LIM-domain binding protein 311 571 IPR029005 -
Bpe03g00133 861 MobiDBLite consensus disorder prediction 657 737 - -
Bpe03g00133 861 MobiDBLite consensus disorder prediction 1 27 - -
Bpe03g00133 861 PANTHER LIM DOMAIN-BINDING PROTEIN 203 860 IPR029005 -
Bpe03g00133 861 PANTHER LIM-DOMAIN BINDING PROTEIN/SEUSS-RELATED 203 860 - -
Bpe03g00133 861 MobiDBLite consensus disorder prediction 778 819 - -
Bpe03g00133 861 MobiDBLite consensus disorder prediction 144 221 - -
Bpe03g00133 861 MobiDBLite consensus disorder prediction 201 215 - -
Bpe03g00133 861 MobiDBLite consensus disorder prediction 144 194 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe03g00133 Bpe-Chr3:1877849 Bpe14g00324 Bpe-Chr14:3175490 2.05E-110 dispersed
Bpe03g00133 Bpe-Chr3:1877849 Bpe03g00300 Bpe-Chr3:4214979 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe03g00133 - - pper:18787712 1148.27