Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe03g00135 ATGGAAGAAATCATTAGTAGCTATGGAACTGTTATCAATCTCTCCTCCATTATCTCTCTTCTTCTTCTCCTTCTTGTGATTTTCAGACCCTTTAATGGCTTCTCTTTATCGAGAACTAAGTCTCTTCTTCCTCCTGGTCCGAAGCCATGGCCAATCTTCGGCAACATTTTCCATTTGGGGAAGAACCCTCATATTTCCTTAGCTGGATTTGCAGAAGCTCACGGGCCTCTGATTTCGCTATGGTTAGGCTCTCAACTCGTCGTTGTTGGGTCGTCTCCAGTGGCGGCTGCTGCTATTCTGAAAACCCACGATAGATATCTCTGCGGTAGAGACAGTCCTAATGTTCTTCCTTACAGAGACTCTGTTCTAAAAGGCTTGTCCATAGTTTGGGCCAGTGAGTGCTCAGTGCAATGGAAGTTTTTAAGATCCTTGTGTAAATCAGAGCTTTTCTCTGCGAAAGCTATGGCTTCTCACGCTGGTTTGAGAGAGAATAAGCTGGGGAAAATGATGAATTTCTTGGCTGAAAATGATGGGAAAGTCGTGAAAATTGGGGAGATTGTGTTTGTTACTCTTTTCAACATAATGAATAATCTTTTCTTCTCTACGGATGGTATGGATTTTGGAGATGAAATGGGAAGTGGTTTGAAAGGGACTGTGATGAAATTGATAGAGTTGGGGAATTCTCCAGATGTGTCTGATTTCTATCCTTATTTGGCATGGTTGGATATTCAAGGTCTGAGAAGGAGTGCTTGCAATCTGTTTGATAAAATGTCTAGTCTGTGGAAAAGTGTGATTAATGATAGAAGAAAAGGCCATGGCCAAGGCTTTCAAGCTCAGCAAGATTTCTTGGATTGTCTTATTGCTAATGGACTGGGCGATGACCAGATGACCATCTTGTTTTTTGAACTATTTGTAGCAGGATCAGACACTCAATCTTCGACAATTGAATGGGCAATGGCCGAGTTACTGAAGAACAAAGAGGCCATGAAAAGACTTCAAGAAGAGCTCAAGACAGAAATCAGTGGAAACTCCATCATCGAATCAGACATTTCCAAGCTTCCCTACTTGCAGGCATGCATCAAAGAAACTCTCAGATTACACCCACCTGCTCCACTTCTCATTCCCCATCGAGCACTCGAAGATTGTGAGACTATGAACTACAAAATCCCGAAAAACACTCAGATTTTTGTCAACCTCTGGATGATAGGACGGGACGGTTTGATCTGGGAAGAACCCTCGTTGTTTAAACCAGAAAGATTTCTCTGCTCTGATGTTGATTTTGCTGGTAATGATTTTGAATTCTTACCCTTTGGATCAGGGAGAAGAATTTGCCCCGGATTACCAATGGCTTCGAGGCAGCTTCCATTGATATTAGCTTCTTTACTTCATTGCTTTGATTGGGATCTTCCCAATGGTGAAGATTGTGCAAAAATAGATATGACTGAGAAATTTGGCCTGACATTGCACAAGGAACAGCCTTTACAGGTTATATCCAAAACTAAATCGAACAGGTGA 1515 41.98 MEEIISSYGTVINLSSIISLLLLLLVIFRPFNGFSLSRTKSLLPPGPKPWPIFGNIFHLGKNPHISLAGFAEAHGPLISLWLGSQLVVVGSSPVAAAAILKTHDRYLCGRDSPNVLPYRDSVLKGLSIVWASECSVQWKFLRSLCKSELFSAKAMASHAGLRENKLGKMMNFLAENDGKVVKIGEIVFVTLFNIMNNLFFSTDGMDFGDEMGSGLKGTVMKLIELGNSPDVSDFYPYLAWLDIQGLRRSACNLFDKMSSLWKSVINDRRKGHGQGFQAQQDFLDCLIANGLGDDQMTILFFELFVAGSDTQSSTIEWAMAELLKNKEAMKRLQEELKTEISGNSIIESDISKLPYLQACIKETLRLHPPAPLLIPHRALEDCETMNYKIPKNTQIFVNLWMIGRDGLIWEEPSLFKPERFLCSDVDFAGNDFEFLPFGSGRRICPGLPMASRQLPLILASLLHCFDWDLPNGEDCAKIDMTEKFGLTLHKEQPLQVISKTKSNR 504
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 1886480 1889258 + Bpe011980.1 Bpe03g00135 100640

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bpe03g00135 504 Gene3D Cytochrome P450 35 504 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bpe03g00135 504 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 437 446 IPR017972 GO:0005506|GO:0016705
Bpe03g00135 504 PANTHER 3'-HYDROXYLASE ISOZYME, PUTATIVE-RELATED 15 501 - -
Bpe03g00135 504 SUPERFAMILY Cytochrome P450 44 497 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bpe03g00135 504 Pfam Cytochrome P450 44 490 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bpe03g00135 504 Coils Coil 315 339 - -
Bpe03g00135 504 PRINTS P450 superfamily signature 444 455 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bpe03g00135 504 PRINTS P450 superfamily signature 306 323 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bpe03g00135 504 PRINTS P450 superfamily signature 358 369 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bpe03g00135 504 PRINTS P450 superfamily signature 435 444 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bpe03g00135 504 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 15 501 - -
Bpe03g00135 504 PRINTS E-class P450 group I signature 444 467 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bpe03g00135 504 PRINTS E-class P450 group I signature 357 375 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bpe03g00135 504 PRINTS E-class P450 group I signature 434 444 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bpe03g00135 504 PRINTS E-class P450 group I signature 295 312 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bpe03g00135 504 PRINTS E-class P450 group I signature 315 341 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bpe03g00135 504 PRINTS E-class P450 group I signature 398 422 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bpe03g00135 504 PRINTS E-class P450 group I signature 71 90 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe03g00135 - - - qsu:112033921 585.874
       

WGDs- Genes

Select Gene_1 Gene_2 Event_name
Bpe03g00135 Bpe07g00949 BCT
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe03g00135 Bpe-Chr3:1886480 Bpe05g00615 Bpe-Chr5:20084773 4.27E-124 dispersed
Bpe03g00135 Bpe-Chr3:1886480 Bpe03g00298 Bpe-Chr3:4089117 0 wgd
Bpe03g00135 Bpe-Chr3:1886480 Bpe07g00949 Bpe-Chr7:15321266 5.89E-161 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi16g606 . Blo15g00156 . . Bpe03g00135 Bpe07g00949 Bma10g01211 . . . . . . . . . . . . . . . . . Cla01g00545 . . . . . . . Cone5ag0838 . . . Csa05g00580 Chy09g00925 . Blo07g00422 Blo09g00081 Bda06g00671 . . . . . . . . . . . . . . . . . . . . . . . . . . . . Lsi09g00589 . . Cme09g01454
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000969 6 2 3 2 3 2 1 3 3 2 3 2 1 1 1 2 2 11 1 3 2 3 2 3 3 3 0 2 4 4 80
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bpe03g00135 Bpe_Chr03 FPKM 0.0 0.0 0.0 0.158619 57.905251 50.572247 61.221592 9.043029 10.386316 9.410174