Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe03g00140 ATGCCTTCATGGTGGGGGAAGTCATCATCCAAAGAAGCAAAGAAAAAGCCTAGCAAGGAAAGTTTTATCGACACATTACAACGAAAATTTAAAGGTTCATCTGAAAATAAAGTATCAGGAGGATCTCGGAGGCATTGTGCTGATACTGCTTCTGAGATTGGATCTAGATCCCCTTTGGAATCAAGATCGCCATCTCCGTCCAAAAAAGTTTCAAGATGTCAAAGTTTTGCTGAAAGGCCTCGTGCTCAACCGCTCCCTCTTCCTGGTCTGCGCCCTGCCGCTGTAAGTCGTACAGATTCTAGTATTAGTGAATCAACAAAGCCTAGATCAGAAAGAAACTCCAAGGCTTCATTGTTTCTTCCACTTCCCAGGCCAGCCTGCATCCGTAGTAGGCCAAGTCCTGCAAATTTAGATGGAGATTTGGTAACTGGTTCTGTTTCTAGTGAGTGTTCATTAGAGAGTGATGATCCTGCTGATTTGCCCTGCCGCAGCCTTCAGGAAGCTGATTGCGACGCAGGGACTAAGACTGCTTCAGCCAGCCCTTCCAGTGTGATTTTCAAGCATCAAGCTACTGCTATCACTCAGCTAAACTCCAGAGGGAGCAAAAAACCAGAAGACCTTTCATTCAATGACAATATATCCTCGACATCGCCTAAAAGGAGGCCTTTGGGCAATCATGTGAAAAATCTACAGGTTCCACCCCCTGGAGCATTCTGTAGTGCTCCGGAAAGTTCTTTGTCAAGTCCTTCTAGAAGCCCGATTAGAGCATATAGCACAGAACAAGTTTTGAACGCCGCATGGAGTGGGAAGCCTTATCCAGATGTAACCTTAATTGGATCTGGCCACTGTTCCAGTCCTGGTTCGGGTCATAATTCAGGGCATAATTCAATGGGAGGTGATATGTCAGGCCAGTTATTTTGGCAACAGAGTAGGGGTAGCCCTGAATATTCTCCAGTGCCGAGTCCTAGAATGACTAGTCCAGGCCCCAGCTCAAGAATTCACAGTGGTGCTGTCACACCTATTCATCCTAGAGAAGGGGGGATGCCCACTGAGTTACAGACTAGCAGGCCAGAAGAGAAACAAAGTCATCGATTACCTCTCCCTCCTATAGGAATTTCAAATTCTTCTCTGTTTTCTCACCCAAGTTCAGCTGTAACATCTCCTTCTCTGCCAAGAAGTCCAGGAAGAGCAGAGACTCCAGCAAGCCCCAGCTCACGCTGGAAAAAAGGGAAACTTCTTGGTAGGGGCACATTTGGACATGTATATGTTGGGTTTAATAGTGAAAGTGGTGAAATGTGTGCAATGAAGGAGGTCACATTATTTTCAGACGACGCAAAGTCTAAGGAAAGTGCCAAACAATTAATGCAGGAAATTGCTTTGCTGAGCCGTTTAAGGCATCCTAACATTGTGCAGTATTATGGGTCTGAAACAGTGGGTGACAAGTTATACATTTACTTGGAGTATGTTTCTGGTGGATCTATTCATAAACTTCTCCAGGAATATGGACAGTTTGGTGAACTAGCAATTCGCAGTTACACTCAACAAATACTTTCAGGCCTTGCATATTTACATGCTAAAAATACTGTCCATAGGGATATCAAAGGAGCAAACATTCTCGTTGATCCAAATGGCCGTGTTAAGTTGGCAGACTTTGGGATGGCAAAACACATTGCTGGGCAGAGTTGTCCGTTGTCTTTCAAGGGCAGCCCCTATTGGATGGCTCCTGAGGTTATTAAAAATTCAAATGGTTGCAACCTTGCTGTGGATATCTGGAGTCTAGGATGCACTGTGTTAGAGATGGCTACCACAAAGCCACCTTGGAGTCAATATGAAGGGGTTGCTGCCATGTTTAAAATTGGTAATAGTAAAGAATTACCAGCAATTCCAGATTACCTCTCAATTGATGGAAAAGATTTTGTGAGGCAATGTTTGCAAAGAAATCCACTTCATCGACCTATGGCTGCTCAACTTTTGGAGCATCCTTTTGTCAAATATGCTGCACCTATAGAAAGGCCAATTCTGGGCTTTGACCAATCAGATCTAAGCCCCATGATTACAAATGGAGTTAAAGCTATGGTAGGTGATTCGTTTTTGTCTCCCAATTTTGATGGTGCAATTCCATGTAACCACCTGAAACATTCTATTTGCTTCCAAGAAGGGTTCGGAAGCATGCCCAAATCGACTACAAATAGTTTTTACAACAATAGTTCTTCCTATCATGACTCAAATCTTGATATTTTTCGCGGGATTCAACCAGGGTCTTGCATTTTTTCTGAGTTGATCATCCTCGAGAATGATGTTTTGAAGCAGGTGGGTAGGCCTGTCTCGGGGGAACCGTACGATAGTCAGTCAATCTTGGCCGATCGTGTGTCTCAGCAGCTCCTCAGTGATAATGCTCAAGTTAATTCTTCTCTGGATTTACGACCTACCTCTCCTTTGTCCAGCCGCATGAGCGGCAAT 2460 44.27 MPSWWGKSSSKEAKKKPSKESFIDTLQRKFKGSSENKVSGGSRRHCADTASEIGSRSPLESRSPSPSKKVSRCQSFAERPRAQPLPLPGLRPAAVSRTDSSISESTKPRSERNSKASLFLPLPRPACIRSRPSPANLDGDLVTGSVSSECSLESDDPADLPCRSLQEADCDAGTKTASASPSSVIFKHQATAITQLNSRGSKKPEDLSFNDNISSTSPKRRPLGNHVKNLQVPPPGAFCSAPESSLSSPSRSPIRAYSTEQVLNAAWSGKPYPDVTLIGSGHCSSPGSGHNSGHNSMGGDMSGQLFWQQSRGSPEYSPVPSPRMTSPGPSSRIHSGAVTPIHPREGGMPTELQTSRPEEKQSHRLPLPPIGISNSSLFSHPSSAVTSPSLPRSPGRAETPASPSSRWKKGKLLGRGTFGHVYVGFNSESGEMCAMKEVTLFSDDAKSKESAKQLMQEIALLSRLRHPNIVQYYGSETVGDKLYIYLEYVSGGSIHKLLQEYGQFGELAIRSYTQQILSGLAYLHAKNTVHRDIKGANILVDPNGRVKLADFGMAKHIAGQSCPLSFKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPAIPDYLSIDGKDFVRQCLQRNPLHRPMAAQLLEHPFVKYAAPIERPILGFDQSDLSPMITNGVKAMVGDSFLSPNFDGAIPCNHLKHSICFQEGFGSMPKSTTNSFYNNSSSYHDSNLDIFRGIQPGSCIFSELIILENDVLKQVGRPVSGEPYDSQSILADRVSQQLLSDNAQVNSSLDLRPTSPLSSRMSGN 820
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 1911806 1922277 + Bpe025361 Bpe03g00140 100645
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe03g00140 820 ProSiteProfiles Protein kinase domain profile. 407 663 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe03g00140 820 MobiDBLite consensus disorder prediction 801 820 - -
Bpe03g00140 820 MobiDBLite consensus disorder prediction 9 26 - -
Bpe03g00140 820 MobiDBLite consensus disorder prediction 284 409 - -
Bpe03g00140 820 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE YODA 1 696 - -
Bpe03g00140 820 MobiDBLite consensus disorder prediction 1 158 - -
Bpe03g00140 820 CDD STKc_MEKK1_plant 406 663 - -
Bpe03g00140 820 MobiDBLite consensus disorder prediction 368 393 - -
Bpe03g00140 820 Gene3D Transferase(Phosphotransferase) domain 1 404 679 - -
Bpe03g00140 820 SMART serkin_6 407 663 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe03g00140 820 MobiDBLite consensus disorder prediction 198 229 - -
Bpe03g00140 820 MobiDBLite consensus disorder prediction 54 72 - -
Bpe03g00140 820 Pfam Protein kinase domain 408 663 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe03g00140 820 MobiDBLite consensus disorder prediction 198 222 - -
Bpe03g00140 820 ProSitePatterns Protein kinases ATP-binding region signature. 413 436 IPR017441 GO:0005524
Bpe03g00140 820 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 1 696 - -
Bpe03g00140 820 MobiDBLite consensus disorder prediction 284 316 - -
Bpe03g00140 820 SUPERFAMILY Protein kinase-like (PK-like) 405 664 IPR011009 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g01619 Bpe-Chr2:19064137 Bpe03g00140 Bpe-Chr3:1911806 1.61E-77 dispersed
Bpe03g00140 Bpe-Chr3:1911806 Bpe12g00439 Bpe-Chr12:10156906 2.65E-10 dispersed
Bpe03g00140 Bpe-Chr3:1911806 Bpe02g00081 Bpe-Chr2:608986 2.56E-79 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63222 PF00069 Pkinase 2.60E-70 CL0016 Bpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe03g00140 K20717 - twl:120003884 1037.71