Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe03g00172 ATGGCGATCGCGGTGCTGAGCGCTCTTGACAATGCTCGAACTCAATGGTACCACGTAACTGCAATCGTGATCGCCGGAATGGGTTTCTTCACCGACGCTTACGATCTCTTCTGTATCTCCACCGTTTCCAAGCTTTTAGGTCGTCTTTACTATTTTGATCCTTCCAGTCCAAAACCTGGAAAGCTCCCCAACAATATCAACAACGCCGTCATCGGGGTTGCCCTTGTCGGAACTTTAATGGGGCAGCTCTTTTTTGGCTGGCTCGGCGATAAGCTTGGCCGGAAAAAAGTCTACGGCGTGACTCTCATTCTGATGGTTCTTTGCGCTATTTGCTCGGGTTTGTCATTTGGGTCGACCGCGAAATCCGTCATCGGAACTCTCTGTTTCTTCAGATTCTGGCTTGGGTTTGGAATCGGCGGAGACTATCCTCTGTCGGCGACGATCATGTCAGAGTATGCTAATAAAAAAACTCGCGGGGCTTTCATTGCCGCCGTTTTCGCCATGCAAGGAGTCGGAATAATATTTGCAGGTCTAGTTTCTTTGACACTCTCCAAAATCTTCCTGCATTTCAACCCCGCTCCAGCTTATCATGATGATAAAGTCTTCTCCACTCAGCCTCAAGCAGATTTTCTATGGCGAATAGTCTTAATGCTCGGAGCTTTACCCGCAGTCGTAACCTATTACTGGCGGATGAAAATGCCGGAAACAGCTCGTTACACCGCCATTATTGAAGGAAATGGAAAGCTAGCTGCTGCAGATATGGGCAAAGTTTTGGACATCGAAATTCAAGCTGATCAAGATAAGGTTTCTCAATTCAAATCGGCAAATGAATACCGCTTGTTCTCTAGAGAATTTGTTCGTCGCCATGGAATGCATTTGGTTGGAACGACCACCACCTGGTTCTTGTTAGACATAGCTTTTTACAGCAGTAATCTGACTCAGAAAGATATTTTTCCGGTGATGCATCTGACGCAGAGCGCTGATAAAGTTAATGCTCTCGAAGAAGTCTACGAGACTTCGAAAGCCATGTTTCTTATTGCCTTGCTCGGAACTTTTCCGGGCTACTGGTTTACAGTAGCGCTTATCGAAAAACTCGGTCGATTCAAAATCCAACTGATGGGATTCTTCATGATGTCTTTGTTCATGGCTATCATCGGAATCAGATACAGTCACCTCAAGCATCACCCTTTCCAATTTGCTGTATTATACGGGCTAACGTTTTTCTTTGCGAATTTTGGCCCTAATAGTACTACGTTTGTTCTTCCGGCCGAGCTTTTTCCGACGAGGGTTAGGTCCACATGCCATGCTTTAAGCGCAGCGTCTGGAAAAGCAGGGGCCATCGTCGGAGCGTTTGGAGTTCAAGGTTATACGTTGGATGGCGATCCAGGCAAGATTCAGAGGGCCATGATCATCTTAGCATTCACCAACTTGCTAGGGTTTTGCTTCACATTCTTAGTGACCGAGACCAAAGGCCGATCATTGGAAGAGATTTCCGGCGAAGATGGCGGCGATGATGAAACTCCTAAACAAGAAAGGAGCATTGACGGAATATGA 1554 46.53 MAIAVLSALDNARTQWYHVTAIVIAGMGFFTDAYDLFCISTVSKLLGRLYYFDPSSPKPGKLPNNINNAVIGVALVGTLMGQLFFGWLGDKLGRKKVYGVTLILMVLCAICSGLSFGSTAKSVIGTLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGVGIIFAGLVSLTLSKIFLHFNPAPAYHDDKVFSTQPQADFLWRIVLMLGALPAVVTYYWRMKMPETARYTAIIEGNGKLAAADMGKVLDIEIQADQDKVSQFKSANEYRLFSREFVRRHGMHLVGTTTTWFLLDIAFYSSNLTQKDIFPVMHLTQSADKVNALEEVYETSKAMFLIALLGTFPGYWFTVALIEKLGRFKIQLMGFFMMSLFMAIIGIRYSHLKHHPFQFAVLYGLTFFFANFGPNSTTFVLPAELFPTRVRSTCHALSAASGKAGAIVGAFGVQGYTLDGDPGKIQRAMIILAFTNLLGFCFTFLVTETKGRSLEEISGEDGGDDETPKQERSIDGI 517
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 2165972 2167760 - Bpe012018.1 Bpe03g00172 100677
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe03g00172 517 Pfam Sugar (and other) transporter 22 498 IPR005828 GO:0016021|GO:0022857|GO:0055085
Bpe03g00172 517 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 3 506 - -
Bpe03g00172 517 MobiDBLite consensus disorder prediction 495 517 - -
Bpe03g00172 517 ProSiteProfiles Major facilitator superfamily (MFS) profile. 21 491 IPR020846 GO:0022857
Bpe03g00172 517 PANTHER INORGANIC PHOSPHATE TRANSPORTER 1-11 3 506 - -
Bpe03g00172 517 SUPERFAMILY MFS general substrate transporter 9 498 IPR036259 -
Bpe03g00172 517 Gene3D MFS general substrate transporter like domains 17 514 IPR036259 -
Bpe03g00172 517 CDD MFS_PhT 22 490 - -
Bpe03g00172 517 TIGRFAM 2A0109: phosphate:H+ symporter 7 500 IPR004738 GO:0005315|GO:0006817|GO:0016021
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe03g00172 Bpe-Chr3:2165972 Bpe13g00559 Bpe-Chr13:12805630 0 dispersed
Bpe03g00172 Bpe-Chr3:2165972 Bpe03g00911 Bpe-Chr3:28835072 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe03g00172 K08176 - csv:101210631 880.167