Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bpe03g00180 | ATGGTATGCAGCATTGGCATACGGAGTATCATTACTCAAGCGGGACGTCTAGGAATATTCTCAAAGAGGCCGGTCCAACTCAGCAATATCCACAAAAATCTTCCCTCGGAACTTTGCTTCACAAACGTTTTTAGGCATGAATTCAGTACAAGTTTAAGGATGATGGTGGATGCAGGAGCAATGGAAAAATGCGGACCAATGGTTGGTATGTTTACACAGAAAGAACAAGATGGTGGATATGTCAGCGGAAGCTTGAAAAGCGAAGATGGAAAATTTAGCTGTGGGTATTCAAGCTTCAGAGGGAAGAGGGCAACAATGGAGGATTGTTTTGATATTAAAATGTCAACAATAGATGGGCAGAGAGTCTGCCTCTTTGGCATATTTGATGGTCATGGTGGATCACGAGCGGCTGAGTATCTGAAGGAGCATCTGTTTGAGAATCTCATGAAGCATCCATTATTCTTGACTGATACTAAATCAGCTATTAGTGCGTTATACTTCTCTTACAACTGCTCCATTTTTTACGTGGTTCTGAAATTCTATAATCTTTCAGGCAAAGCATATCAACAGACAGATTCAGATTTTTTGGACTCTGAAAAAGATATTTACCGTGATGATGGTTCTACTGCTTCAACTGCAGTATTGATTGGAAATCATCTGTTTGTTGCCAATGTTGGAGACTCACGCACTGTTATATCAAAAGGAGGCAGAGGAGCCTGCTGTTTTTTGTTGACAGCAATCGCACTCTCAAAGGATCATAAACCAAATAGAACTGATGAGAGGCAGAGAATTGAGAATGCAGGGGGTGTTGTGATGTGGGCAGGTACGTGGAGGGTAGGAGGCGTGTTAGCTATGTCGCGTGCATTTGGAAACCGGATGTTGAAGCAATTTGTTGTGGCCGACCCGGAGATTCAGGATGAGGAAATCGATGCAGATTTCGAATTACTTGTTATAGCAAGTGATGGTTTGTGGGACACGGATGCAATATCGCTTGCGCTCGCAGAAGAGGAGGCAGAGGAAGCAGCCCGAAAGCTAACAGAAGCAGCCTTCACCCGTGGGAGTGCTGACAACATAACATGCATTGTGGTAAGGCTCCACCATGACAAACAACCCCCATCAACTCCTCAAAATGAATAA | 1137 | 43.62 | MVCSIGIRSIITQAGRLGIFSKRPVQLSNIHKNLPSELCFTNVFRHEFSTSLRMMVDAGAMEKCGPMVGMFTQKEQDGGYVSGSLKSEDGKFSCGYSSFRGKRATMEDCFDIKMSTIDGQRVCLFGIFDGHGGSRAAEYLKEHLFENLMKHPLFLTDTKSAISALYFSYNCSIFYVVLKFYNLSGKAYQQTDSDFLDSEKDIYRDDGSTASTAVLIGNHLFVANVGDSRTVISKGGRGACCFLLTAIALSKDHKPNRTDERQRIENAGGVVMWAGTWRVGGVLAMSRAFGNRMLKQFVVADPEIQDEEIDADFELLVIASDGLWDTDAISLALAEEEAEEAARKLTEAAFTRGSADNITCIVVRLHHDKQPPSTPQNE | 378 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 3 | 2211240 | 2214794 | - | Bpe012026.2 | Bpe03g00180 | 100685 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bpe03g00180 | 378 | PANTHER | PROTEIN PHOSPHATASE 2C 52-RELATED | 186 | 373 | - | - | |
| Bpe03g00180 | 378 | Coils | Coil | 331 | 351 | - | - | |
| Bpe03g00180 | 378 | ProSitePatterns | PPM-type phosphatase domain signature. | 124 | 132 | IPR000222 | GO:0043169 | |
| Bpe03g00180 | 378 | SMART | PP2C_4 | 83 | 363 | IPR001932 | - | |
| Bpe03g00180 | 378 | PANTHER | ALPHABET, ISOFORM E-RELATED | 186 | 373 | - | - | |
| Bpe03g00180 | 378 | Pfam | Protein phosphatase 2C | 94 | 358 | IPR001932 | - | |
| Bpe03g00180 | 378 | ProSiteProfiles | PPM-type phosphatase domain profile. | 93 | 365 | IPR001932 | - | |
| Bpe03g00180 | 378 | PANTHER | PROTEIN PHOSPHATASE 2C 52-RELATED | 45 | 166 | - | - | |
| Bpe03g00180 | 378 | PANTHER | ALPHABET, ISOFORM E-RELATED | 45 | 166 | - | - | |
| Bpe03g00180 | 378 | CDD | PP2Cc | 92 | 365 | IPR001932 | - | |
| Bpe03g00180 | 378 | Gene3D | - | 81 | 372 | IPR036457 | - | |
| Bpe03g00180 | 378 | SUPERFAMILY | PP2C-like | 88 | 366 | IPR036457 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Bpe02g00524 | Bpe-Chr2:3410677 | Bpe03g00180 | Bpe-Chr3:2211240 | 2.56E-105 | dispersed | |
| Bpe03g00180 | Bpe-Chr3:2211240 | Bpe08g00594 | Bpe-Chr8:4303300 | 1.52E-46 | dispersed | |
| Bpe03g00180 | Bpe-Chr3:2211240 | Bpe04g00100 | Bpe-Chr4:714252 | 4.45E-109 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bpe03g00180 | K17506 | - | zju:107414609 | 494.967 |