Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bpe03g00182 | ATGGAAGACGAGGTGAGCGTGGAGTTAAAGTTTGCGACGAAGCAGGGTGCGAAGTTTGATTTCTTCGCCGTGTACGACGGGCATGGAGGCGCCGAGATCGCCCGGATTTGCAAAGAAAGGCTGCACAGGGTAGTAGCGGAGGAAATAGAGGGAGAGAAAGAAAAGCAGGTGGAGTGGGAGAGAATGATGGAAAAATGCTTCGGGAGAATGGACGAGGAGGTGATTGGCGGTCCCGCAGCGATGAAGACGGTGGGTTCGACGGCAGTTGTGGTGGTGGTGGGGCCGGAAGAGGTGGTCGTTGCCAATTGCGGCGACAGCAGGGTGGTGTTGGCGAGGAATGGTGTTTCAGTAGCCTTGTCTGATGATCATAAGCCTGGGAGGGCCGATGAAATCAAGAGAATTGAGGCTGCCGGAGGCAAAGTTATAAACTGGAATGGCTGTCGTGTTCTCGGAGTTCTAGCTACATCGAGGTCGATAGGAGACGAGTATCTTAAGCCCTTCGTGATCTCGAAACCGGAAGTGACGGTGACCAAGCGAACAGACAAAGATGAGTTCCTCATACTAGGAAGCGACGGGCTTTGGGACGTCGTCTCAAACGACCATGCATGCCAAATGGCAAGAAGATTCCTTGGTGGGCATAGGCGGAGGATTGCATCCCCAACAATGATGCCGAACGGAAGGCTCGCAGTTGGTGCAGCTGCGGCTTTGGCCGAGCTAGCAATAGCTAAAGGCAGTGGAGATAACATAAGTGCGATCGTAGTTGAGCTTCAAAAGCCAAGTGATTTTTATTCTCTTTAG | 798 | 52.63 | MEDEVSVELKFATKQGAKFDFFAVYDGHGGAEIARICKERLHRVVAEEIEGEKEKQVEWERMMEKCFGRMDEEVIGGPAAMKTVGSTAVVVVVGPEEVVVANCGDSRVVLARNGVSVALSDDHKPGRADEIKRIEAAGGKVINWNGCRVLGVLATSRSIGDEYLKPFVISKPEVTVTKRTDKDEFLILGSDGLWDVVSNDHACQMARRFLGGHRRRIASPTMMPNGRLAVGAAAALAELAIAKGSGDNISAIVVELQKPSDFYSL | 265 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 3 | 2223585 | 2224916 | - | Bpe012028.1 | Bpe03g00182 | 100687 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bpe03g00182 | 265 | ProSiteProfiles | PPM-type phosphatase domain profile. | 1 | 256 | IPR001932 | - | |
| Bpe03g00182 | 265 | CDD | PP2Cc | 1 | 256 | IPR001932 | - | |
| Bpe03g00182 | 265 | ProSitePatterns | PPM-type phosphatase domain signature. | 21 | 29 | IPR000222 | GO:0043169 | |
| Bpe03g00182 | 265 | PANTHER | PHOSPHATASE 2C FAMILY PROTEIN | 1 | 258 | - | - | |
| Bpe03g00182 | 265 | Pfam | Protein phosphatase 2C | 5 | 249 | IPR001932 | - | |
| Bpe03g00182 | 265 | Gene3D | - | 1 | 261 | IPR036457 | - | |
| Bpe03g00182 | 265 | PANTHER | ALPHABET, ISOFORM E-RELATED | 1 | 258 | - | - | |
| Bpe03g00182 | 265 | SUPERFAMILY | PP2C-like | 1 | 258 | IPR036457 | - | |
| Bpe03g00182 | 265 | SMART | PP2C_4 | 2 | 254 | IPR001932 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Bpe03g00182 | Bpe-Chr3:2223585 | Bpe04g01718 | Bpe-Chr4:23010274 | 1.98E-84 | dispersed | |
| Bpe03g00182 | Bpe-Chr3:2223585 | Bpe15g01272 | Bpe-Chr15:21139929 | 1.76E-85 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bpe03g00182 | K14497 | - | csv:101214188 | 338.961 |