Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe03g00229 ATGGCTTTGCTAAGCCCTCGATTACAAAGATTTCGGCTCGCCAAGATCAACTCGTCGTTTGTTTCTTCGTCTTCCTCAAAGAACACGAGCAGACTTCGGTTCCGTGGCAGAGGGCGATGCTGCTCAGCTATAGCCATTGACGCCCCATCTTCATTGGCTGATGTCAGTGGGATTAGATGGGGTTCGACTAGCCTGCAAGGTCCACGAGATGAAATGGAGGACGACGTTGTTGTTCGTTCCGATGGACTCAACGGCTTCTTGTTTGCAGCCGTGCTAGATGGTCACGGTGGAATCTCTTCCGTCAAGTTTCTCAGGGATGAATTGTACAAAGAGTGTGTAGCATCTTTACAAGATGGGCTTGTGTTGAGTGGAGACAACTTCAAAACCATCAAAGAGTCATTAATCAAAGCTTTTGAATATACAGATAAGAAACTGCTAGAATGGCTTGAAACAAAGGGGGCAGAAGATGAATCTGGCTCTACAGCAACCGTTATGCTCATTGGGACAAATGTATTGTTCATTTCACATATAGGCGACTCATCTGTGGTTCTATCCCGTTCTGGAGGAGCTCAAGTGTTGACAAATCCTCACCGTCCTTATGGAAGCAACAATGCCTCATTGCAAGAAATCCGAAGAATTAGAGAAGCAGGTGGATGGATTGTCAACGGGAGGATCTGCGGAGATATTGCTGTATCTCGTGCCTTTGGTGACATAAGATTCAAGACGAAGAAAACTGAGATGCTCAGAAAAGGGGTCGAGGAGCGAAGATGGTCTGAAAAGTTTGTTTCTCGAGTACAGTTCAGTAAAGACTTGGTCTCTGCTTCCCCAGATATTTTTCAAGTAGCTCTAGGATCAGATGCAGAGTTTATTTTACTAGCATCTGATGGCTTATGGGACTACATAAACAGCTCGGATGCTGTCAATTTTGTTCGAAACCAGCTCAGACAACATGGCGATGTTCAGCTAGCGAGTGAAGCTCTTGCCCAGGCAGCTTTGAACTCACGGACGCAAGATAACGTTAGCATTGTGATTGCCGATTTTGGAAGGACCGACTGGAAGAACTTGGCAGTCCAACACCAGAATACGGCGTATGAATTAGTCCAAGCTGTTGCTACGGTTGGAATAGTAGGGATTGGAATTTGGATTTCATCCCAACTTGCTTTGTAA 1167 45.59 MALLSPRLQRFRLAKINSSFVSSSSSKNTSRLRFRGRGRCCSAIAIDAPSSLADVSGIRWGSTSLQGPRDEMEDDVVVRSDGLNGFLFAAVLDGHGGISSVKFLRDELYKECVASLQDGLVLSGDNFKTIKESLIKAFEYTDKKLLEWLETKGAEDESGSTATVMLIGTNVLFISHIGDSSVVLSRSGGAQVLTNPHRPYGSNNASLQEIRRIREAGGWIVNGRICGDIAVSRAFGDIRFKTKKTEMLRKGVEERRWSEKFVSRVQFSKDLVSASPDIFQVALGSDAEFILLASDGLWDYINSSDAVNFVRNQLRQHGDVQLASEALAQAALNSRTQDNVSIVIADFGRTDWKNLAVQHQNTAYELVQAVATVGIVGIGIWISSQLAL 388
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 3079683 3082400 - Bpe012084.1 Bpe03g00229 100734
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe03g00229 388 PANTHER PROTEIN PHOSPHATASE 2C 7 384 IPR015655 GO:0004722|GO:0006470
Bpe03g00229 388 SMART PP2C_4 49 345 IPR001932 -
Bpe03g00229 388 SUPERFAMILY PP2C-like 56 348 IPR036457 -
Bpe03g00229 388 ProSiteProfiles PPM-type phosphatase domain profile. 59 347 IPR001932 -
Bpe03g00229 388 PANTHER PROTEIN PHOSPHATASE 2C 57 7 384 - -
Bpe03g00229 388 Pfam Protein phosphatase 2C 61 340 IPR001932 -
Bpe03g00229 388 CDD PP2Cc 58 347 IPR001932 -
Bpe03g00229 388 Gene3D - 58 354 IPR036457 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe03g00229 Bpe-Chr3:3079683 Bpe01g00628 Bpe-Chr1:4185663 1.86E-30 dispersed
Bpe03g00229 Bpe-Chr3:3079683 Bpe02g00303 Bpe-Chr2:1997928 4.49E-32 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe03g00229 K04457 - twl:119983635 541.191