Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe03g00235 ATGGGCTATGGAAAGCTAAAGTCGTCTGACCCAGGAGGGTTGCCCTTTGACCAATCGGAAGCTTCCTCCTCACACCCACCGCCACCACGTAGCAGGAGGAAGAAGCTCCTCTTCCTCTCTCTCCTCTCTATCACTCTACTCCTCGCCGCAGTCGTCTCCGCCGTTCTCCTCGTCGGCCTACGAAATCGAGCTTCGGGTCAATCCGGAACTAATCTCACCCGCAAACCGACCCAGGCCATTTCGAGGACCTGTAGCCGAACTCGGTTCCCGGCCCTTTGTGTCAACTCGCTCGTCGACTTCCCTGGCTCTCAGGCCGCAACGGAACACGACCTCGTCCACATTTCATTCAATTTGACGCTGCAGCATTTCTCCAGAGCCCTCTATCTTTCCGCCGGAATCTCTAATTTGCCGATGAATCCTCGAGTACGATCTGCCTACGAATCTTGCCTCGAGCTGCTCGACGATTCGATTGACGCCCTCGCTCGCTCACTGCTCTCCATCGCACCTCCTCCGGACGATGACGCTCAATCCGTTGGTTCCATCCCGGATGTTCTCACCTGGCTCAGCGCCGCACTGACCAACCAAGACACCTGTATGGAAGGATTCGACGATGTGAGTGGAACTGTCAAGAGTCAAATGACTGAAAGCCTTCGGGACTTGTCGGAGCTAGTGAGCAACTGTTTGGCCATTTTCTCCAGCACCGATTCCAGCGATTTTTCAGGCGTGCCGATTCAGAACCGGCGGCGGCTAATGGAAGCTGGCGACACATTGGACGAAAAAGAGGAGAAAACGGTGGATTTTCCGAAATGGATGAGCCGGAAAGAGAGGGAACTACTGAGTGTACCGGTGTCGGCGATTCAAGCAGATATGGTGGTGTCGAAGGATGGAAACGGAACTTGCAAGACAATAACGGAGGCGATCAAAAAAGCGCCGGAGTACGGCGATCGCCGAACAATAATTTACGTGATGGCAGGAAGGTACGAAGAGGAAAACTTGAAGGTGGGGAGGAAGAAGACGAACCTCATGTTCATCGGGGACGGGAAGGGCAAAACGGTCATATCGGGTGGCAAAAGCGTGTTTGATGAGCTGACGACGTTTCACACGGCCTCGTTCGCTGCTACGGGAGCCGGTTTAATCTTACGGGACATGACGTTTGAGAATTGGGCCGGACCGAGCAAGCACCAGGCGGTGGCCCTTCGAATTGGAGCGGACCATGCCGTGGTTTATCGCTGCAACATCATCGGCTACCAAGACACCCTCTATGTGCACTCCAATCGTCAATTCTTCCGAGAGTGTGACATTTACGGTACTGTAGATTTCATTTTCGGCAATGCGGCCGTGGTGTTCCAAAACTGCAGTATTTTCGCTCGCAAGCCCATGGATCAACAAAAGAACACCATCACCGCCCAAAACCGAAAGGACCCGAATCAAAACTCGGGAATTTCAATCCACGCTTGCCGGATTATGGCCACGCCTGACCTCGAGTCGTCAAAGAGCAATTTCTCGACTTATCTTGGTCGTCCGTGGAAACTATACTCCAGAACAGTGTACATGTTATCGTACATAGGGGATCACGTACATCCGAGAGGATGGCTAGAATGGAACGCGACCTTTGCATTGGACACATTATACTACGGGGAATACATGAATTACGGTCCGGGCGGGGCGGTGGGTCAACGGGTCACTTGGCCGGGGTACCGGGTCATCACGTCGGCCATAGAGGCCAGCAAGTTCACAGTCGCTCAATTCATATATGGATCGTCGTGGTTGCCGAACACCGGAGTGGCGTTCTTGGCCGGATTAGCAGACTAA 1812 53.48 MGYGKLKSSDPGGLPFDQSEASSSHPPPPRSRRKKLLFLSLLSITLLLAAVVSAVLLVGLRNRASGQSGTNLTRKPTQAISRTCSRTRFPALCVNSLVDFPGSQAATEHDLVHISFNLTLQHFSRALYLSAGISNLPMNPRVRSAYESCLELLDDSIDALARSLLSIAPPPDDDAQSVGSIPDVLTWLSAALTNQDTCMEGFDDVSGTVKSQMTESLRDLSELVSNCLAIFSSTDSSDFSGVPIQNRRRLMEAGDTLDEKEEKTVDFPKWMSRKERELLSVPVSAIQADMVVSKDGNGTCKTITEAIKKAPEYGDRRTIIYVMAGRYEEENLKVGRKKTNLMFIGDGKGKTVISGGKSVFDELTTFHTASFAATGAGLILRDMTFENWAGPSKHQAVALRIGADHAVVYRCNIIGYQDTLYVHSNRQFFRECDIYGTVDFIFGNAAVVFQNCSIFARKPMDQQKNTITAQNRKDPNQNSGISIHACRIMATPDLESSKSNFSTYLGRPWKLYSRTVYMLSYIGDHVHPRGWLEWNATFALDTLYYGEYMNYGPGGAVGQRVTWPGYRVITSAIEASKFTVAQFIYGSSWLPNTGVAFLAGLAD 603
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
3 3128996 3131175 - Bpe012089.1 Bpe03g00235 100740
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Bpe03g00235 603 PANTHER PECTINESTERASE 28 601 - -
Bpe03g00235 603 TIGRFAM PME_inhib: pectinesterase inhibitor domain 49 232 IPR006501 GO:0004857
Bpe03g00235 603 Pfam Pectinesterase 289 586 IPR000070 GO:0030599|GO:0042545
Bpe03g00235 603 SUPERFAMILY Pectin lyase-like 284 600 IPR011050 -
Bpe03g00235 603 Gene3D Invertase/pectin methylesterase inhibitor family protein 77 234 IPR035513 -
Bpe03g00235 603 PANTHER PECTINESTERASE 28 601 - -
Bpe03g00235 603 CDD PMEI-like_3 84 230 - -
Bpe03g00235 603 Pfam Plant invertase/pectin methylesterase inhibitor 79 230 IPR006501 GO:0004857
Bpe03g00235 603 Gene3D - 283 601 IPR012334 -
Bpe03g00235 603 MobiDBLite consensus disorder prediction 1 31 - -
Bpe03g00235 603 ProSitePatterns Pectinesterase signature 2. 434 443 IPR033131 -
Bpe03g00235 603 SMART PMEI_2 75 230 IPR006501 GO:0004857
Bpe03g00235 603 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 78 232 IPR035513 -
       

Event-related genes


Select Gene_1 Gene_2 Event_name
Bpe03g00235 Bpe12g00391 CCT
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe03g00235 Bpe-Chr3:3128996 Bpe03g00695 Bpe-Chr3:27078457 3.40E-153 dispersed
Bpe12g00391 Bpe-Chr12:9331378 Bpe03g00235 Bpe-Chr3:3128996 1.91E-116 wgd
Bpe03g00188 Bpe-Chr3:2281330 Bpe03g00235 Bpe-Chr3:3128996 0 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe03g00235 - - zju:107414790 901.353