Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe03g00305 ATGTCCTATTTTGGGAACCAACACTCTTCCTACTACTCTACTGGTTCTGGTTCAAGTTCAAACCCTCCTCCAGATGGTGGCTCCTCCTCTGGTGGGCGGAATTCTCCACCGCCATCCGGGCGCCACTCTAAGTACCGAGGAGTTCGGAGCAGGAGCGGGAAATGGGTGTCGGAAATTCGCGAGCCCCGTAAAACTACACGCATTTGGCTTGGGACTTATCCCACACCAGAGATGGCAGCAGCCGCCTATGATGTGGCGGCTCTGGCCTTAAAAGGGCCGGATACGACATTGAATTTCCCGGATTCGATGTATTCCTACCCTGTTCCTGCTTCTACTTCTGCCAACGATATAAGGGCAGCTGCAGCAAGGGCTGCGGAGGCTCGGCAGCCCTCGTCGACTTCAGGAGGGAACTCAAGGGCTGGTCAATTGGGAAACGAAGACGGGACGAATTCCCGATGGGCTGCCGGACAAGAGTATGTGGATGAAGATGCTCTGTTGAACATGCCGAATTTGCTGGCTGATATGGCGGAAGGAATGATGGTTAGCCCGCCGAGGATACAGTATCCTGACTCCTCGTCGGACAATTTCAATGGAGATGAGCTTTGGCGATGA 612 54.08 MSYFGNQHSSYYSTGSGSSSNPPPDGGSSSGGRNSPPPSGRHSKYRGVRSRSGKWVSEIREPRKTTRIWLGTYPTPEMAAAAYDVAALALKGPDTTLNFPDSMYSYPVPASTSANDIRAAAARAAEARQPSSTSGGNSRAGQLGNEDGTNSRWAAGQEYVDEDALLNMPNLLADMAEGMMVSPPRIQYPDSSSDNFNGDELWR 203
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 4389013 4389624 + Bpe012159.1 Bpe03g00305 100810
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe03g00305 203 Gene3D AP2/ERF domain 43 101 IPR036955 GO:0003700|GO:0006355
Bpe03g00305 203 SMART rav1_2 44 106 IPR001471 GO:0003700|GO:0006355
Bpe03g00305 203 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF026 35 202 - -
Bpe03g00305 203 MobiDBLite consensus disorder prediction 1 37 - -
Bpe03g00305 203 CDD AP2 43 102 IPR001471 GO:0003700|GO:0006355
Bpe03g00305 203 Pfam AP2 domain 43 92 IPR001471 GO:0003700|GO:0006355
Bpe03g00305 203 ProSiteProfiles AP2/ERF domain profile. 44 100 IPR001471 GO:0003700|GO:0006355
Bpe03g00305 203 SUPERFAMILY DNA-binding domain 43 102 IPR016177 GO:0003677
Bpe03g00305 203 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 35 202 - -
Bpe03g00305 203 MobiDBLite consensus disorder prediction 127 151 - -
Bpe03g00305 203 MobiDBLite consensus disorder prediction 186 203 - -
Bpe03g00305 203 MobiDBLite consensus disorder prediction 119 151 - -
Bpe03g00305 203 MobiDBLite consensus disorder prediction 183 203 - -
Bpe03g00305 203 MobiDBLite consensus disorder prediction 1 61 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe03g00127 Bpe-Chr3:1804297 Bpe03g00305 Bpe-Chr3:4389013 5.56E-51 dispersed
Bpe03g00305 Bpe-Chr3:4389013 Bpe03g01247 Bpe-Chr3:31107035 5.35E-48 dispersed
Bpe12g00413 Bpe-Chr12:9713435 Bpe03g00305 Bpe-Chr3:4389013 6.64E-23 dispersed
Bpe12g00412 Bpe-Chr12:9705559 Bpe03g00305 Bpe-Chr3:4389013 6.27E-38 wgd
Bpe03g00126 Bpe-Chr3:1798623 Bpe03g00305 Bpe-Chr3:4389013 9.53E-38 wgd
Bpe03g00305 Bpe-Chr3:4389013 Bpe07g00954 Bpe-Chr7:15344622 3.77E-49 wgd
Bpe03g00305 Bpe-Chr3:4389013 Bpe07g00128 Bpe-Chr7:906679 1.11E-43 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
21082 PF00847 AP2 3.30E-12 CL0081 Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe03g00305 - - jre:108998614 201.83