Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bpe03g00318 | ATGTTGAGCGATGATGACAAGGATTTGCCGACGAAATGCCGTGGGAGGAGGCGCCGACGAATAGAGATGAGGCGTGTGGCGACTGCATCAACGGCGAGTTCATCTCATGCTAGGAGTCGAAGCGAGAGGGAAAGTCGTTTAGAAGACCAGTCGGGCTCTGAAATCAAGCGGATTCGTGTAGGGAACTCGTCGTCTTCTTCCTCCGACAACAACGTAGAGGACGATACGGCAGTGAAAGAGATGGTTGATGTAGTCCCGATGGTGGAGCCAATGTTCGGGACTATGTCTATTTCCGGTAGGTCGAGAGAGATGGAGGACGCGATATCTGTACGGACAGGACTGTGTCAGCAGGCGCTTTGCCGGCGGCAACCGATGCACTTCTTCGCAGTGTACGATGGACACGGAGGAGCTCACGTGGCGGAACTTTGTAGGGAAAGGATGGAGTCGTTGGTGGAGGAGGAACTGATGACGGCTGGAAGTATGCGCTCCGAGAGTGCGAGCGGAGGTGAGGAGGATGAGGAGGAATGGAAGGGGGTGCTAAAGAAGAGCTTCGAGAGGATGGACGAGGTGGCTCTGAGCACGTGCGCCTGTGGGAGCGTTGGGGGGCACTGCGGGTGCCATCCCATGGAGGTTGCTCTCGGTGGATCCACCGCCGTAGTTGCCATACTTACCCCCGAACACATTGTCGTTGCCAACTGCGGCGACTCACGCGCCGTCCTCTGCCGTGGCAAAAGAGCAATCGCTTTGTCCAATGATCACAAGCCGGATAGACCAGACGAATTAGCGAGAATCGAAGCGGCTGGCGGACGAGTTATTTTTGTCAACGGAGCTCGTGTCGAAGGCATTCTTGCAATGTCCCGAGCCATAGGTAATTTTTGA | 879 | 55.63 | MLSDDDKDLPTKCRGRRRRRIEMRRVATASTASSSHARSRSERESRLEDQSGSEIKRIRVGNSSSSSSDNNVEDDTAVKEMVDVVPMVEPMFGTMSISGRSREMEDAISVRTGLCQQALCRRQPMHFFAVYDGHGGAHVAELCRERMESLVEEELMTAGSMRSESASGGEEDEEEWKGVLKKSFERMDEVALSTCACGSVGGHCGCHPMEVALGGSTAVVAILTPEHIVVANCGDSRAVLCRGKRAIALSNDHKPDRPDELARIEAAGGRVIFVNGARVEGILAMSRAIGNF | 292 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 3 | 4653698 | 4655114 | + | Bpe012172.2 | Bpe03g00318 | 100823 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bpe03g00318 | 292 | MobiDBLite | consensus disorder prediction | 37 | 55 | - | - | |
| Bpe03g00318 | 292 | SUPERFAMILY | PP2C-like | 91 | 291 | IPR036457 | - | |
| Bpe03g00318 | 292 | MobiDBLite | consensus disorder prediction | 56 | 72 | - | - | |
| Bpe03g00318 | 292 | Gene3D | - | 85 | 292 | IPR036457 | - | |
| Bpe03g00318 | 292 | Pfam | Protein phosphatase 2C | 93 | 292 | IPR001932 | - | |
| Bpe03g00318 | 292 | ProSitePatterns | PPM-type phosphatase domain signature. | 127 | 135 | IPR000222 | GO:0043169 | |
| Bpe03g00318 | 292 | SMART | PP2C_4 | 81 | 292 | IPR001932 | - | |
| Bpe03g00318 | 292 | MobiDBLite | consensus disorder prediction | 1 | 76 | - | - | |
| Bpe03g00318 | 292 | CDD | PP2Cc | 91 | 292 | IPR001932 | - | |
| Bpe03g00318 | 292 | ProSiteProfiles | PPM-type phosphatase domain profile. | 91 | 292 | IPR001932 | - | |
| Bpe03g00318 | 292 | PANTHER | ALPHABET, ISOFORM E-RELATED | 32 | 291 | - | - | |
| Bpe03g00318 | 292 | PANTHER | PROTEIN PHOSPHATASE 2C 75-RELATED | 32 | 291 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Bpe03g00318 | Bpe-Chr3:4653698 | Bpe04g01718 | Bpe-Chr4:23010274 | 1.72E-59 | dispersed | |
| Bpe03g00318 | Bpe-Chr3:4653698 | Bpe01g00119 | Bpe-Chr1:688960 | 9.22E-60 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bpe03g00318 | K14497 | - | zju:107414392 | 331.643 |