Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe03g00345 ATGGAAAGAGCTCTGAGTGCCCGAAGTTATGCAGCGCAACTTGGGGAAAATTGTGAAAACGATCGGCAGAAGGCTGCTTGGTCGGACTGCTTAAAGCTTTATGATAACACTATTCTTCAACTACATAGAATCCTTCAAGGCCTAAGCAAGTCTCAAAGTTGCTCGGACTTTGATGTGCAAACGTGGCTGAGTGCTGCCCTGACCAACATCGAAACGTGTCGCACTGGTGCAAAAGAACTTCTTGTTTCAGATTTCATTAGTGGAATCACGTCGGCAAATGTGTCTGAACTTATCAGCAATGGTTTGGCTATTAATAGAATGATGTTGGATGTTAAGGAAAGGATAAATTATTCAATAAGTGAAGAAAATGGCTTTCCGGTCAAGGGTCAAAAATATCCGAGTTGGGTGGTGAACGGCGATCAGAAATTGTTGGCTTCTTCAACTGTGACAGCAAATCTGGTGGTGGCCAAAGACGGGTCTGGGAATTTCACGACTGTTCAGGCAGCAATAGATGCGGCGGGGAAGAGAAGTGGGAGGGGAAGGTTTGTTATATATGTGAAGACAGGTATTTATCGAGAAAATGTTGAAGTTGGAGCCAATAATAATTACATTATGATGGTTGGAGGTGGGATGAAAAAGACAATAATTACAAGTGATAGAAGTGTTGGAAGAGGCTTTACAACCTACAATTCTGCCACTGCTGGAATTGATGGTCTTGGCTTCATAACACGGGGGATTACATTCATTAATGGAGCCGGTCCAAAAATGGGTCAGGCGGTTGCTCTTAGATCAGCCTCCGATCTCGCCGTTTTCTACCGATGCGCCTTTTATGGGTATCAAGACACTCTTATGGTCCTCTCACAAAGGCAATTCTATAGAGAGTGTTACATCTACGGCACAATTGACTTCATTTTTGGTAATGCAGCTGTAGTCTTTCAAAAATGCATCATCTATGTGAAAAAACCCTTAAAGGGCCAAGTTAATGTGATCACGGCTCAAGGTCGAAACGATCCGAATCAAAATACCGCAATTTCAATACACAAATCACAAATTCGAGCCGCTCCTGATCTTAAGCCAGTGGTTCATGCTTTCAGGACGTACTTAGGCCGACCATGGATGCGCTATTCTCGAACTGTTATTTTGAAAACTTACATGGATAATTTGGTGAGTCCCGTCGGGTGGTTGGCCTGGCAAAACAGTAATTTTGCTTTAAGCACTCTGTATTATGGTGAGTATAATAACTTCGGCCCTAGGGCTTCAACCAAGTATAGGGTGAGATGGAGGGGCTTTCACGCAATTACAAGCCCACAAATTGCCTCCCGATTTACTGTAGGTAGCCTCATTTCCGGCCAGTTGTGGTTGTCGACTACCGGAGTTCCATTCTCAGCTGGACTCTGA 1398 43.92 MERALSARSYAAQLGENCENDRQKAAWSDCLKLYDNTILQLHRILQGLSKSQSCSDFDVQTWLSAALTNIETCRTGAKELLVSDFISGITSANVSELISNGLAINRMMLDVKERINYSISEENGFPVKGQKYPSWVVNGDQKLLASSTVTANLVVAKDGSGNFTTVQAAIDAAGKRSGRGRFVIYVKTGIYRENVEVGANNNYIMMVGGGMKKTIITSDRSVGRGFTTYNSATAGIDGLGFITRGITFINGAGPKMGQAVALRSASDLAVFYRCAFYGYQDTLMVLSQRQFYRECYIYGTIDFIFGNAAVVFQKCIIYVKKPLKGQVNVITAQGRNDPNQNTAISIHKSQIRAAPDLKPVVHAFRTYLGRPWMRYSRTVILKTYMDNLVSPVGWLAWQNSNFALSTLYYGEYNNFGPRASTKYRVRWRGFHAITSPQIASRFTVGSLISGQLWLSTTGVPFSAGL 465
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 6173372 6174869 + Bpe012212.1 Bpe03g00345 100850
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe03g00345 465 Pfam Pectinesterase 152 450 IPR000070 GO:0030599|GO:0042545
Bpe03g00345 465 SUPERFAMILY Pectin lyase-like 146 464 IPR011050 -
Bpe03g00345 465 TIGRFAM PME_inhib: pectinesterase inhibitor domain 6 108 IPR006501 GO:0004857
Bpe03g00345 465 Gene3D - 145 465 IPR012334 -
Bpe03g00345 465 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 2 109 IPR035513 -
Bpe03g00345 465 ProSitePatterns Pectinesterase signature 1. 178 197 IPR018040 -
Bpe03g00345 465 Pfam Plant invertase/pectin methylesterase inhibitor 2 104 IPR006501 GO:0004857
Bpe03g00345 465 CDD PMEI-like_3 1 105 - -
Bpe03g00345 465 SMART PMEI_2 1 104 IPR006501 GO:0004857
Bpe03g00345 465 PANTHER PECTINESTERASE 1 464 - -
Bpe03g00345 465 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 59-RELATED 1 464 - -
Bpe03g00345 465 ProSitePatterns Pectinesterase signature 2. 297 306 IPR033131 -
Bpe03g00345 465 Gene3D Invertase/pectin methylesterase inhibitor family protein 1 108 IPR035513 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe03g00345 Bpe12g00391 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe03g00345 Bpe-Chr3:6173372 Bpe14g00892 Bpe-Chr14:6662463 9.12E-170 dispersed
Bpe12g00391 Bpe-Chr12:9331378 Bpe03g00345 Bpe-Chr3:6173372 7.44E-117 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe03g00345 K01051 - qsu:112007203 638.262