Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe03g00412 ATGATTACTGTTGCGTCATCTATTGAAGCACAGCAGCCGGAGATTTCTCCGACGATGGTTAAAACCGCAGGTCCGGACATTCTTAGTAAGGCGGATTCCGAAACTAAGCACGTCTTTAAATCGAAGCTACCCGACATTCCCATCTCTAACGAGCTCCCTCTTCCGACTTACTGCTTCGAACGCCTCTCCGAGTTCTCCGACCGTCCATGTCTGATCGTTGGATCCACCGGGAAAACTTACACGTTCGCAGAAACCCATTTCATTTCCCAGAGAATCGGAGCCGGATTGACAAAACTCGGTATAAAAAAGAACGACGTGATTATGATTCTCCTCCAAAACTGCGCTGAATTCGTTCTGACATTCGTTGGAGCGGCCATGATCGGTGCCGTCACCACTACAGCCAACCCTTTCTACACCGGTGCCGAAGTTTTCAAGCAGATAAAATCCTCCGGCGCCAAACTGATTGTCACGCAGTCCCAATATGTGGAAAAACTCCGAGAGACGGCGGATGATGATCCCAAGTTCGGCGAGGATTTCACCGTAATAACCATTGACAACCCCCCGGAGAAATGCATACACTTCTCGGCAATTTCTGAGGCTAACGAGGCCGATCTTCCAGCTGTCTCTATCGAGCCAGAAGACCCAGTGGCGCTTCCGTTCTCCTCCGGCACCACCGGCCTTCCGAAGGGAGTAATTCTCACCCACAAAAGCTTAATAACCAGTGTGGCTCAGCAAGTAGACGGAGAAAATCCAAATCTATATCTAACTACTGACGACGTCGTTTTGTGCGTTCTCCCTCTTTTCCACATATACTCTCTCAACAGCGTCCTTTTGTGTTCCTTGAGAGCAGGAGCAGCCGTTTTGCTTATGCAAAAGTTCGAGATAGGGGCATTTTTGGAATTAATTGTCCGGCACAAGGTGTCAGTGGCCGCAGTCGTTCCGCCGCTGGTTTTGGCGTTGGCAAAGAATCCGAAGGTGGCGGAGTTCGACCTCAGCTCCATCCGGGTGGTGTTGTCCGGGGCGGCGCCGCTGGGCAAGGAGCTCGAGGAGGCGCTCAAGAGCCGACTGCCGCAAGCCACGCTTGGGCAGGGATATGGGATGACTGAGGCAGGGCCAGTGCTGTCAATGTGTTTGGGTTTCGCCCGGCAGCCATTCCCGACCAAATCTGGGTCGTGCGGGACGGTGGTCAGAAATGCGGAGCTGAAGGTCATCGACCCTCTCACCGGCACCTCCCTTGGTTACAACCAGCCGGGAGAAATCTGCATTCGTGGCTCCCAAATTATGAAAGGGTATTTGAACGACGATGAAGCCACGGCAAACACCATTGATGTTGAGGGATGGCTTCACACTGGAGATATTGGTTATGTCGACGATGAAGATGAAGTTTTCATAGTTGATCGTGTAAAAGAACTCATTAAGTTCAAAGGATTTCAGGTGCCACCAGCTGAGCTCGAGTCTCTTCTTGTGAGCCACCCATCAATTGCAGACGCAGCAGTAGTGCCGCAAAAAGATGTAGTTGCTGGGGAAGTTCCTGTTGCGTTTGTTGTTCGTTCAAATGGGTTTGAACTCAGTGAAGATGCCGTCAAGGAATACATTGCCAAACAGGTGGTATTTTACAAGAAACTTCACAGAGTATACTTTGTGCATGCAATTCCAAAGTCTCCAGCAGGAAAGATTTTGAGAAAGGATTTAAGAGCAAAGCTTTCACCGCCT 1713 50.38 MITVASSIEAQQPEISPTMVKTAGPDILSKADSETKHVFKSKLPDIPISNELPLPTYCFERLSEFSDRPCLIVGSTGKTYTFAETHFISQRIGAGLTKLGIKKNDVIMILLQNCAEFVLTFVGAAMIGAVTTTANPFYTGAEVFKQIKSSGAKLIVTQSQYVEKLRETADDDPKFGEDFTVITIDNPPEKCIHFSAISEANEADLPAVSIEPEDPVALPFSSGTTGLPKGVILTHKSLITSVAQQVDGENPNLYLTTDDVVLCVLPLFHIYSLNSVLLCSLRAGAAVLLMQKFEIGAFLELIVRHKVSVAAVVPPLVLALAKNPKVAEFDLSSIRVVLSGAAPLGKELEEALKSRLPQATLGQGYGMTEAGPVLSMCLGFARQPFPTKSGSCGTVVRNAELKVIDPLTGTSLGYNQPGEICIRGSQIMKGYLNDDEATANTIDVEGWLHTGDIGYVDDEDEVFIVDRVKELIKFKGFQVPPAELESLLVSHPSIADAAVVPQKDVVAGEVPVAFVVRSNGFELSEDAVKEYIAKQVVFYKKLHRVYFVHAIPKSPAGKILRKDLRAKLSPP 571
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 21054353 21057314 + Bpe025370 Bpe03g00412 100917
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe03g00412 571 CDD 4CL 48 564 - -
Bpe03g00412 571 Gene3D - 469 569 IPR045851 -
Bpe03g00412 571 SUPERFAMILY Acetyl-CoA synthetase-like 41 568 - -
Bpe03g00412 571 Pfam AMP-binding enzyme 61 474 IPR000873 -
Bpe03g00412 571 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 37 567 - -
Bpe03g00412 571 PANTHER 4-COUMARATE--COA LIGASE 3 37 567 - -
Bpe03g00412 571 ProSitePatterns Putative AMP-binding domain signature. 218 229 IPR020845 -
Bpe03g00412 571 Gene3D - 29 468 IPR042099 -
Bpe03g00412 571 Pfam AMP-binding enzyme C-terminal domain 483 558 IPR025110 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe03g00412 Bpe-Chr3:21054353 Bpe04g01221 Bpe-Chr4:17441406 0 dispersed
Bpe03g00412 Bpe-Chr3:21054353 Bpe02g02090 Bpe-Chr2:22385872 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe03g00412 K01904 - tcc:18599509 907.901