Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe03g00490 ATGCCACTTCTCCGTAGACATTGGCGAAAACATATATCACCTCATGCTGCACCGAGAGCTGTATCAGCACCAATCAATCCTCCATATTTTGGTCATCTATCTACTTCGGATCCATCACCTGCAAGCTCAAGTTTGTCTAGACCATTGATGAAGAAGAGTGGAATTGTACCTCCTAATTCTGGATTCAAAAGCATTGCTCCAATACAGTCCAATGCTGGTTTACCCCAGCCCCCACTGTCTCCTGCTTCTGACTGTTGCAAACCAGACATGGTTCTGAAGCGAGGAAGTCAAGATTGCCACTGTGTATATCCCATAAAGCTTGACCTTCTCCTTTTGAATGTCTCACAAAATCCTAATTGGAATATTTTTCTTGAGGAATTAGCTTCCCAACTCGGTTTGCGAGTTTCTCAGATTGACCTTATAAACTTCTATGTACTTAGTTATTCGAGATTAAATCTTTCAATGGACATTACTCCACATACAGGAATCAGTTTCTCTGCTAAGGATGCAGAGTCAATAAACTCTTCACTTGCCATGCATAAGGTTCATTTAAACGCTACTTTAGTGGGAGACTATAAACTTCTCAATATGACCTGGTTTAAGCCCCCACTTCCTTCTGAAGCTCCTCTTGCAACACCATCGCCTGTGGCAACCCCTGTGTATCCATCATCAGCTTCTACATCAGCCCATTCTTCTCATAAAGTGAAACATTCATACCTGATTCTTATTCTAGGAATTGGTGCTGGTCTGCTGTTTATTGCCATTTTCTCCATGCTGGTTTTGTGTTTGTACTTCTATCATAATGGGAAAACTAAAGCATCTCCAGTGATAGAAGAAAAAACAAGAACTGTGGAAGCAGTTTCTGCTGGAGGATCTTTTGCCCATCCAACCAGTACAAGATTTCTAGCTTATGAAGAACTGAAAGAAGCAACCAATAACTTTGAAGCTGCAAGCATACTAGGAGAGGGTGGCTTCGGCAGGGTTTTCAGGGGTGTCTTAAGTGACGGCACGCCTGTTGCTATAAAGAGGCTTACCAGTGGAGGGCAACAAGGGGACAAAGAATTTCTGGTTGAAGTTGAGATGCTTAGTAGGTTGCATCACCGTAATCTTGTGAAACTTGTAGGTTACTTCAGCAATCGTGATTCATCACAGAACCTATTATGCTATGAACTTGTACCAAATGGGAGTTTAGAATCCTGGCTCCATGGGCCACTTGGTTTAAACTGCCCCTTAGATTGGGACACCAGAATGAAAATTGCACTAGATGCAGCTAGAGGACTTGCATACCTCCATGAGGACTCGCAACCTTGTGTTATCCATAGAGACTTCAAGGCATCCAATATTTTGCTCGAGAACAACTTTAATGCTAAAGTTGCTGATTTTGGCCTGGCAAAACAAGCTCCTGAAGGCAGAGCAAATTACCTATCTACGCGAGTGATGGGCACATTTGGGTATGTAGCTCCTGAGTATGCAATGACGGGGCACCTGCTCGTTAAAAGCGATGTTTATAGTTACGGGGTTGTTCTTCTTGAATTGATTACCGGAAGGAAGCCAGTGGATATGTCTCAACCGTCTGGACAGGAAAACCTAGTAAATTGGGCCAGACCAATTCTTAGAGACAAGGATAGGCTGGAAGAACTGCTTGATCCAAGGCTTGGAGGAAAATATCCTAAGGAAGACTTTTTACGTGTTTGCACAATAGCCGCAGCCTGTGTTGCTACCGAGGCCAACCAACGACCCACGATGGGCGAAGTTGTACAGTCGCTGAAGATGGTGCAGCGCATCACAGAGTATCATGATTCGTCATTGCCAGCTTCCAACAATCGACCCAACTTAAGACAATCATCAACCACTTTCGAGTCAGATGGGACATCGTCCGTATTCTCTTCCGGCCCCTATTCTGGTGTCAGTGCTTTTGACAATGACAACGTCTCTCGCATAGCGATTTTCTCCGAAGATCTTCATGAAGGAAGATGA 1977 43.9 MPLLRRHWRKHISPHAAPRAVSAPINPPYFGHLSTSDPSPASSSLSRPLMKKSGIVPPNSGFKSIAPIQSNAGLPQPPLSPASDCCKPDMVLKRGSQDCHCVYPIKLDLLLLNVSQNPNWNIFLEELASQLGLRVSQIDLINFYVLSYSRLNLSMDITPHTGISFSAKDAESINSSLAMHKVHLNATLVGDYKLLNMTWFKPPLPSEAPLATPSPVATPVYPSSASTSAHSSHKVKHSYLILILGIGAGLLFIAIFSMLVLCLYFYHNGKTKASPVIEEKTRTVEAVSAGGSFAHPTSTRFLAYEELKEATNNFEAASILGEGGFGRVFRGVLSDGTPVAIKRLTSGGQQGDKEFLVEVEMLSRLHHRNLVKLVGYFSNRDSSQNLLCYELVPNGSLESWLHGPLGLNCPLDWDTRMKIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFNAKVADFGLAKQAPEGRANYLSTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELITGRKPVDMSQPSGQENLVNWARPILRDKDRLEELLDPRLGGKYPKEDFLRVCTIAAACVATEANQRPTMGEVVQSLKMVQRITEYHDSSLPASNNRPNLRQSSTTFESDGTSSVFSSGPYSGVSAFDNDNVSRIAIFSEDLHEGR 658
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 24626403 24630147 - Bpe012399.1 Bpe03g00490 100995
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe03g00490 658 SUPERFAMILY Protein kinase-like (PK-like) 292 591 IPR011009 -
Bpe03g00490 658 Gene3D Phosphorylase Kinase; domain 1 295 391 - -
Bpe03g00490 658 CDD STKc_IRAK 320 590 - -
Bpe03g00490 658 Pfam Protein tyrosine and serine/threonine kinase 317 589 IPR001245 GO:0004672|GO:0006468
Bpe03g00490 658 PANTHER OS01G0750732 PROTEIN 2 658 - -
Bpe03g00490 658 Gene3D Transferase(Phosphotransferase) domain 1 392 609 - -
Bpe03g00490 658 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE ALE2 2 658 - -
Bpe03g00490 658 ProSiteProfiles Protein kinase domain profile. 314 592 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe03g00490 658 ProSitePatterns Serine/Threonine protein kinases active-site signature. 438 450 IPR008271 GO:0004672|GO:0006468
Bpe03g00490 658 MobiDBLite consensus disorder prediction 600 627 - -
Bpe03g00490 658 ProSitePatterns Protein kinases ATP-binding region signature. 320 342 IPR017441 GO:0005524
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe01g00199 Bpe-Chr1:1203378 Bpe03g00490 Bpe-Chr3:24626403 4.08E-78 dispersed
Bpe03g00490 Bpe-Chr3:24626403 Bpe09g00415 Bpe-Chr9:7056448 3.95E-127 dispersed
Bpe14g01077 Bpe-Chr14:8064746 Bpe03g00490 Bpe-Chr3:24626403 1.05E-86 dispersed
Bpe03g00490 Bpe-Chr3:24626403 Bpe06g00777 Bpe-Chr6:18032245 2.75E-121 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63232 PF07714 PK_Tyr_Ser-Thr 1.80E-44 CL0016 Bpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe03g00490 - - csv:101219278 1026.54