Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe03g00493 ATGGAGGAGGAGAAAGAAGAGACAAAGATGGAGGAGAAAATTGGAGGATCGTTACTATTTTCCGGGATTTCGTCCAACAGTCATTCATTTTCAGGCATCCTAGACTTCTCCGAGTCGGAAAAGACTTGGCTAGGGTTTATGGATCTTCTGGGAGTTGAAAAACTCTCTCTTCCATCTCTTTTTGATTTTCCATCTCTCCCTATTTTCACTTCAAATCCAAAAAACGATCATCTCAAAGAGGGTTCCGAAGTTTTCAATCATCCTCCCACTCCTAACTCTCCCTCCATCTCATCTACTTCTTGTGAAGATGCAGTAAATTATAATCAGCACCAAGCTAAAGCTCTGAACCAGGAAGAAGAACGTGAGAAAAAGACTCGAAAACATTTGAAAGCGAAGAAGAAAGATGTAAAGAGGGAGAGAGAGCCAAGATTTGCATTCGTGACGAAGAGCGAAGTTGATCATCTGGAGGATGGGTATAGATGGAGAAAGTACGGCCAAAAAGCTGTGAAGAACAGCCCTTTTCCTAGGAGCTACTATCGTTGCACTAGCATAGCGTGTAATGTGAAGAAAAAAGTAGAACGATCTTTCAGCGATCCAACTATTGTAGTCACAACCTACGAAGGTCAGCACACGCACCCAAGCCCTGTCATGGCTCGACCAACCTTGACCATGGCTGCACCACACGGTTTGGCCACAGCAAATCAAACCACAACCCTATCTCGCTTTCACTACCAAGACTACAGCAGCAATAACTTCTCTCCAAACGCGGTGTTTTTCAGTGATAGGCGAGCTGGTAAGCAAGGACCTGCTTCGGCTTTAACGCCGGACAATGGACTTCTCCAAGATATTTTACCCTCTCATATGCTGAAGCAGGAATAA 879 44.37 MEEEKEETKMEEKIGGSLLFSGISSNSHSFSGILDFSESEKTWLGFMDLLGVEKLSLPSLFDFPSLPIFTSNPKNDHLKEGSEVFNHPPTPNSPSISSTSCEDAVNYNQHQAKALNQEEEREKKTRKHLKAKKKDVKREREPRFAFVTKSEVDHLEDGYRWRKYGQKAVKNSPFPRSYYRCTSIACNVKKKVERSFSDPTIVVTTYEGQHTHPSPVMARPTLTMAAPHGLATANQTTTLSRFHYQDYSSNNFSPNAVFFSDRRAGKQGPASALTPDNGLLQDILPSHMLKQE 292
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 24696111 24697751 + Bpe012402.1 Bpe03g00493 100998
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe03g00493 292 MobiDBLite consensus disorder prediction 80 101 - -
Bpe03g00493 292 Gene3D WRKY domain 140 216 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bpe03g00493 292 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 5 259 IPR044810 GO:0003700
Bpe03g00493 292 SUPERFAMILY WRKY DNA-binding domain 147 215 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bpe03g00493 292 Coils Coil 107 139 - -
Bpe03g00493 292 MobiDBLite consensus disorder prediction 86 101 - -
Bpe03g00493 292 ProSiteProfiles WRKY domain profile. 150 215 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bpe03g00493 292 MobiDBLite consensus disorder prediction 113 135 - -
Bpe03g00493 292 Pfam WRKY DNA -binding domain 156 213 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bpe03g00493 292 PANTHER WRKY TRANSCRIPTION FACTOR 5 259 - -
Bpe03g00493 292 SMART WRKY_cls 155 214 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe03g00493 Bpe10g00506 CCT
Bpe03g00493 Bpe10g00506 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe03g00493 Bpe-Chr3:24696111 Bpe14g01092 Bpe-Chr14:8150578 9.85E-73 dispersed
Bpe15g00386 Bpe-Chr15:15387358 Bpe03g00493 Bpe-Chr3:24696111 5.47E-32 dispersed
Bpe11g01486 Bpe-Chr11:11058563 Bpe03g00493 Bpe-Chr3:24696111 6.69E-34 transposed
Bpe10g00506 Bpe-Chr10:12250802 Bpe03g00493 Bpe-Chr3:24696111 2.06E-69 wgd
Bpe13g00706 Bpe-Chr13:13646723 Bpe03g00493 Bpe-Chr3:24696111 2.51E-81 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
21095 PF03106 WRKY 4.50E-26 CL0274 Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe03g00493 - - jre:108993709 288.5