Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe03g00505 ATGCTCGGGGCATTGGGATGTGTATTCCCAGAGCTCCTCTCTAGAAACGGGGTCAAATTCGGCGAAGCCGTCTGGTTCAAAGCCGGTTCACAAATATTCAGCGAGGGAGGGCTGGACTACCTTGGAAACCCAAGCCTGGTTCATGCACAGAGCATTTTGGCCATTTGGGCATCTCAGGTTATCTTGATGGGTGCCGTTGAGGGTTACCGCATTGCCGGAGGGCCACTAGGGGAGGTGACCGACCCCATCTACCCAGGAGGAAGCTTTGATCCCCTGGGGCTTGCTGATGACCCAGAGGCATTTGCCGAGCTTAAGGTGAAAGAAATCAAGAATGGACGACTAGCTATGTTCTCCATGTTTGGATTCTTCGTGCAAGCCATTGTCACCGGAAAGGGACCTTTGGAGAACCTCGCCGATCATCTGGCCGACCCTGTCAACAACAATGCTTGGGCTTATGCCACAAACTTTGTACCTGGAAAGTGA 483 52.8 MLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWASQVILMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 160
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 24943515 24943997 - Bpe012413.1 Bpe03g00505 101010
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe03g00505 160 SUPERFAMILY Chlorophyll a-b binding protein 1 157 - -
Bpe03g00505 160 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 160 IPR001344 GO:0009765|GO:0016020
Bpe03g00505 160 Gene3D Chlorophyll a/b binding protein domain 1 153 - -
Bpe03g00505 160 PANTHER CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC 1 160 - -
Bpe03g00505 160 Pfam Chlorophyll A-B binding protein 1 126 IPR022796 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe03g00505 Bpe-Chr3:24943515 Bpe14g00731 Bpe-Chr14:5674397 6.13E-107 dispersed
Bpe03g00505 Bpe-Chr3:24943515 Bpe02g00968 Bpe-Chr2:9084368 4.00E-114 transposed
Bpe03g00505 Bpe-Chr3:24943515 Bpe11g01102 Bpe-Chr11:8254009 2.55E-115 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe03g00505 K08912 - mnt:21386411 327.02