Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe03g00512 ATGTCTCGCCAAACACCCTCGTCGGCTTTCCATAAGTCTAAGACTCTCGATAATAAATATATGCTGGGAGATGAGATTGGGAAGGGGGCATATGGGCGAGTTTACAAGGGCTTGGATTTGGAGAATGGGGATTTTGTTGCCATTAAGCAAGTTTCTTTGGAGAATATTGCTCAGGAGGATCTCAATATTATTATGCAAGAGATTGATTTATTGAAGAATTTGAATCACAAAAACATTGTCAAGTATCTTGGATCTTCAAAAACAAAGACCCATCTTCACATAATACTTGAGTATGTGGAGAATGGTTCACTTGCTAACATAATAAAACCAAACAAGTTTGGCCCTTTTCCAGAATCATTGGTTGCTTTTTACATTACTCAGGTTTTAGAAGGCTTGGTTTATCTCCACGAACAGGGTGTTATTCACCGGGACATTAAGGGTGCAAACATACTGACAACTAAAGAGGGTCTCGTAAAACTAGCTGATTTTGGGGTTGCAACAAAGTTGAATGAGGCTGATGTTAATACACACTCAGTTGTCGGAACACCATATTGGATGGCCCCAGAGGTGATTGAAATGTCGGGGGTTTGTGCTGCCTCTGACATTTGGGGTGTTGGATGCACTGTCATTGAGCTACTTACTTGTGTACCTCCTTATTATGATCTTCAGCCTATGCCAGCACTCTATCGCATTGTTCAGGACAAGCACCCTCCAATCCCCGATGGTCTCTCTCCAGATATCACAGATTTTCTTCGCCAGTGCTTTAAAAAGGATGCTAGGCAAAGGCCAGATGCAAAAGCATTACTTTCTCATCCCTGGATTCAAAATTGTAAGCCCGCTTTGCAGTCTTCTCTCCGTCACAGTGGACCATTAAGAGATATTCATGAAGATGTTTCGGGTGATGCAGAAATTTATAATATCAATAATCAAAACTCTTGCGAAACACCTTTGGCTATTAAAGTTGAACTAGTTGATTCTGATATTAAAGGGGATGAGGAGTTATTGTCGACAGTTATTAACATAAACAAGTCTGATAAAGATCATGCCTCAGATTCTAATTTCCTTGAGGAAAGGAGAGATCACCTAGAAGATGTTATAATGATGGATCAGACTCCCATTTTAACCGCACAACAAAAATCAACTCTTCTGGCTAGTTCTACTCAAATATCTTCTAGTAAGGAAGTGACTGCCTTTGAGTCAGCTGCGTTTCATGAGCTGCCACACGGTAATGATGAAATGCTGATGAATGGGGATCTGGAATCTCCTGAATCTAATAGAAAAACCATGTCCAAGAAACATGGAGGGAAAGGAACATTCCTGCATAATACTGGTAGATCATTTGGTTTTGGATCGAGAGGTCAAGATAATATTGCACTTAAGACATCAAAGGCATCTGTTACCTTGGAAGGCAATGAACTTAGTAGGTTTAGTGACACTCCAGGAGATGCTACCTTGGATGACTTATTTCATCCATTGGATAAACAACTGGAGAATCAAGGAGGCAAAGCTTCAACATCTACTTCTGCATACAATCTGAATCAAATTAATGTCCCATTAACCGAAGCTTGTAAAAATGACCTGGCTACAAAATTGAGAGCTACAATTGCTCAAAAGAAAATGGAAAATGAAATGGGAAAAACAAATGTAGGGGGTGACCTGTTGCGCCTAATGATGGGTGTTCTAAAGGATGATGCAATTGATATTGATGGTTTGGTGTTTGATGAAAAATTGACTGGAGAAAACCCTTTTCCCCTACAGGCTGTTGAGTTTAGCAGATTAGTTGAGTTGTTGAGACCTGAGGAACCTGAAGATGTGATTGAGTCTTGTTGTGGGAAGCTTATTGCGATTTTTCATCGACAATCTGAGCAGAAGCTTGTGTATGTCACCCAGCATGGTTTGCTTCCTCTAATGGAATTGCTAGAGGTTCCTAAACCTCGTGTCATCTGTTCTGTGCTTCAACTTATAAATCAGATAATTAAAGATAATACTGATTTTCAAGAAAATGCCTGTCTTGTTGGTCTGATTCCTTTGGTAATGGGATTTGCTGTACCTGATCGTCCCCGAGAAGTTCGTATGGAAGCAGCATATTTCTTACAGCAACTTTGTCAATCAAGCTCCTTGACATTACAAATGTTTATTGCTTGTCGTGGAATACCTGTGTTGATTGGCTTTCTGGAGGCTGATTATGCAAAATATAGGGAAATGATTCATTTAGCCATTGATGGCATGTGGCAGATCTTTAAGCTCCAGAGATCAACTCCTAGAAATGATTTCTGTCGTATAGCAGCAAAGAATGGAATTTTGCTCAGACTTATTAACACTCTTTATAGTCTGAATGAGGCAACTCGTCTGGCTGCTATTTCTGTTGGGGGTGGATTGTCAGTTGATGGTACAACCCAGCAGCCACGCTCGGGCCAACTTGATGTTAGTCATCCCATATTCGGTCAACTTGAGCCTTCATCTTCTCCGTCAGATCAGGCTGATCCGACAAAGACCAAGTATGGAAGCATTGATCGTCACTTGCCAACTGGCATACTAGAATCTTCATTTGCTTCATCATCACATTCTCAAAGAATAGACGTCAATCAGTTGGATCATCGACAACTTTCCATAGATGCCGATCGACCTCCATCGGCCAATGGTACATTTGAAGCTTCAGTTATTTCTAAAGATGCAAGTTTACCATCTAAAGATCCACCTACTAGTACCCCTAAAGAACGAGAAAACTTAGATAGATGGAAAGTTGACCCTTCTCGAGCAGATGGTGAACAAAGACAGCAGCGGATTGCCAATTCAACAAATAGGACTTCAAATGAAAAGTCACTGAAATTAATGGAATCTACAAATGGGTGCTCTGTCGCTGCTGCTGCTGCTTCACAAGACCAAGTACGCCCTCTTTTAAGTCTGTTAGAGAAGGAGCCCCCTTCCCGACAATTCTCTGGTCAGCTGGAGTACATGCGCCATCTCTCTGGATTAGAGAGACATGAAAGCATATTACCTCTATTGCATTCATCTAACGAAAAAAAGATAAATGGTGAACTCGATTTTCTAATGGCAGAATTTGCAGATGTTTCTCAACGTGGAAAAGAAAATGGGAGTCTTGAATCGTTTGCTAGAATTTCCAATAAAACTGTAATGAAGAAGGTTGGACCACTATCACCTAATGATGTAGCAGCCTCTACCTCAGGGGTTGCTTCTCAGACAGCATCGGGTGTGCTGTCTGGTTCAGGTGTTTTAAATGCTAGACCAGGGAGTGCGGCTTCCTCTGGGCTGCTTGCACATATGGTTTCGACTTTAAATGCAGATGTTGCGAGGGATTACCTAGCAAAAGTGGCAGATCTTCTTCTTGAATTTTCTCTGGCTGACACGACTGTAAAGTCCTATATGTGCAGCCAAAGTTTGCTTAGTCGTCTTCTCCAGATGTTCAATAAAGTAGAGCCCTCAATTCTATTGAAGATACTGAAATGTATAAACCATTTGTCTACTGATCCAAATTGCCTGGAGTCTCTTCAGCGAGCCGATGCCATTAAATATTTAATCCCAAACCTTGAACTCAAAGAAGGATCTCTTGTTTCTCAAATACGTCATGAGGTTCTTAATGCACTATTTAACTTGTGCAAAATAAATAAGAGAAGACAGGAACATGCTGCTGAAAATGGAATCATTCCCCATTTGATGCATTTTATAATGTCAGATTCCCCACTGAAGAGATATGCCCTTCCTCTGCTATGTGATATGGCTCACGCATCTCGTAATTCAAGAGAGCAGTTAAGAGCTCATGGAGGATTGGATGTCTACTTGAGCCTTCTGGAGGATGAGCTTTGGTCTGTCACGGCCTTGGACTCTCTTGCCGTTTGTTTGGCCCATGACAATGACAACCGAAAAGTCGAACAGGCTTTGCTGAAAAAAGATGTAGTTCAGAAATTGGTGAAATTCTTTCAATGCTGTCCAGAACAACATTTTGTTCACATATTGGAGCCCTTCTTAAAAATTATCACCAAATCTTCCCGCATCAATACGACATTAGCTGTCAATGGTTTAACACCATTGCTCATTGCAAGGCTGGACCATCAGGACGCGATAGCCCGTCTTAATCTGCTAAAACTGATAAAGGCTGTTTACGAGCACCACCCGCGGCCAAAGCAACTGATAGTGGAGAATGATTTGCCGCAGAAGCTCCAGAATCTAATAGAGGAAAGAAGAGACGGACAACGGTCTGGTGGGCAGGTTCTGGTAAAACAAATGGCCACTTCTCTGCTTAAAGCACTTCACATCAACACCGTTTTGTAA 4290 41.38 MSRQTPSSAFHKSKTLDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYLGSSKTKTHLHIILEYVENGSLANIIKPNKFGPFPESLVAFYITQVLEGLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLNEADVNTHSVVGTPYWMAPEVIEMSGVCAASDIWGVGCTVIELLTCVPPYYDLQPMPALYRIVQDKHPPIPDGLSPDITDFLRQCFKKDARQRPDAKALLSHPWIQNCKPALQSSLRHSGPLRDIHEDVSGDAEIYNINNQNSCETPLAIKVELVDSDIKGDEELLSTVININKSDKDHASDSNFLEERRDHLEDVIMMDQTPILTAQQKSTLLASSTQISSSKEVTAFESAAFHELPHGNDEMLMNGDLESPESNRKTMSKKHGGKGTFLHNTGRSFGFGSRGQDNIALKTSKASVTLEGNELSRFSDTPGDATLDDLFHPLDKQLENQGGKASTSTSAYNLNQINVPLTEACKNDLATKLRATIAQKKMENEMGKTNVGGDLLRLMMGVLKDDAIDIDGLVFDEKLTGENPFPLQAVEFSRLVELLRPEEPEDVIESCCGKLIAIFHRQSEQKLVYVTQHGLLPLMELLEVPKPRVICSVLQLINQIIKDNTDFQENACLVGLIPLVMGFAVPDRPREVRMEAAYFLQQLCQSSSLTLQMFIACRGIPVLIGFLEADYAKYREMIHLAIDGMWQIFKLQRSTPRNDFCRIAAKNGILLRLINTLYSLNEATRLAAISVGGGLSVDGTTQQPRSGQLDVSHPIFGQLEPSSSPSDQADPTKTKYGSIDRHLPTGILESSFASSSHSQRIDVNQLDHRQLSIDADRPPSANGTFEASVISKDASLPSKDPPTSTPKERENLDRWKVDPSRADGEQRQQRIANSTNRTSNEKSLKLMESTNGCSVAAAAASQDQVRPLLSLLEKEPPSRQFSGQLEYMRHLSGLERHESILPLLHSSNEKKINGELDFLMAEFADVSQRGKENGSLESFARISNKTVMKKVGPLSPNDVAASTSGVASQTASGVLSGSGVLNARPGSAASSGLLAHMVSTLNADVARDYLAKVADLLLEFSLADTTVKSYMCSQSLLSRLLQMFNKVEPSILLKILKCINHLSTDPNCLESLQRADAIKYLIPNLELKEGSLVSQIRHEVLNALFNLCKINKRRQEHAAENGIIPHLMHFIMSDSPLKRYALPLLCDMAHASRNSREQLRAHGGLDVYLSLLEDELWSVTALDSLAVCLAHDNDNRKVEQALLKKDVVQKLVKFFQCCPEQHFVHILEPFLKIITKSSRINTTLAVNGLTPLLIARLDHQDAIARLNLLKLIKAVYEHHPRPKQLIVENDLPQKLQNLIEERRDGQRSGGQVLVKQMATSLLKALHINTVL 1429
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 25060582 25085265 + Bpe012420.2 Bpe03g00512 101017
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe03g00512 1429 MobiDBLite consensus disorder prediction 797 839 - -
Bpe03g00512 1429 SMART serkin_6 20 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe03g00512 1429 MobiDBLite consensus disorder prediction 882 900 - -
Bpe03g00512 1429 ProSitePatterns Protein kinases ATP-binding region signature. 26 49 IPR017441 GO:0005524
Bpe03g00512 1429 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 2 1385 - -
Bpe03g00512 1429 SMART arm_5 1209 1248 IPR000225 GO:0005515
Bpe03g00512 1429 SMART arm_5 620 660 IPR000225 GO:0005515
Bpe03g00512 1429 SMART arm_5 1122 1162 IPR000225 GO:0005515
Bpe03g00512 1429 SMART arm_5 1163 1207 IPR000225 GO:0005515
Bpe03g00512 1429 Gene3D Transferase(Phosphotransferase) domain 1 17 302 - -
Bpe03g00512 1429 SUPERFAMILY ARM repeat 591 788 IPR016024 -
Bpe03g00512 1429 Gene3D - 578 801 IPR011989 -
Bpe03g00512 1429 MobiDBLite consensus disorder prediction 901 923 - -
Bpe03g00512 1429 CDD STKc_Cdc7_like 19 274 - -
Bpe03g00512 1429 MobiDBLite consensus disorder prediction 924 941 - -
Bpe03g00512 1429 SUPERFAMILY Protein kinase-like (PK-like) 17 275 IPR011009 -
Bpe03g00512 1429 SUPERFAMILY ARM repeat 1095 1403 IPR016024 -
Bpe03g00512 1429 Gene3D - 1075 1424 IPR011989 -
Bpe03g00512 1429 ProSitePatterns Serine/Threonine protein kinases active-site signature. 140 152 IPR008271 GO:0004672|GO:0006468
Bpe03g00512 1429 MobiDBLite consensus disorder prediction 815 831 - -
Bpe03g00512 1429 MobiDBLite consensus disorder prediction 871 941 - -
Bpe03g00512 1429 Pfam Protein kinase domain 21 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe03g00512 1429 PANTHER MAP KINASE KINASE KINASE 2 1385 - -
Bpe03g00512 1429 ProSiteProfiles Protein kinase domain profile. 20 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe03g00512 Bpe-Chr3:25060582 Bpe12g00439 Bpe-Chr12:10156906 1.80E-60 dispersed
Bpe14g00364 Bpe-Chr14:3471716 Bpe03g00512 Bpe-Chr3:25060582 2.82E-46 dispersed
Bpe02g01865 Bpe-Chr2:20720127 Bpe03g00512 Bpe-Chr3:25060582 3.51E-66 transposed
Bpe08g01251 Bpe-Chr8:13994374 Bpe03g00512 Bpe-Chr3:25060582 4.46E-26 transposed
Bpe11g00115 Bpe-Chr11:783673 Bpe03g00512 Bpe-Chr3:25060582 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63234 PF00069 Pkinase 1.50E-71 CL0016 Bpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe03g00512 - - qlo:115981871 2140.54