Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe03g00537 ATGGACTGGGTTCGTGGTCGCAAACTGGGTTCCGGTGCTTTTGCGACGGTCTATTTGGCAGGCAAGAGGGATGATTCCCATCTCTTTCCGCCTTTGATGGCCGTTAAATCTTCTGAATTCTCCTTCTCTCAATCGCTCAGGCACGAGAGAGAAGTTCTGCGGCGACTCGATTCTTGCCCGGAGATCATTCGCTGTTTCGGCGACGATATCACCGTCGAAAGGGACGAGAAGTTGTACAATCTCGTTTTGGAGTACGCTTCCGGAGGGAGTCTGGTGGATCAACTGGACAAGTACGGCGGACGTTTGCCAGAATCGTTAGTTCGGCGATACACCAGAGGAATATTGAAAGGGCTTGATTTCATTCACTCCAAAGGGTTCGTCCACTGTGACATAAAACTCGGGAACATTTTGGTGGTCGACAATGGCGATGTTAAGATTGCTGATTTTGGGCTGGCGAAGATGCCCGGGCAAGAAATATCAACGGAGGAAGGAAACTTTGAGTTGAGGGGAACGCCTCTGTCTATTGCGCCGGAATCCGTCACCGACAATGAGTACGAGTCACCCTGCGACATTTGGGCTCTTGCCTGTGCCGTCGTCGAGATGTTCACCGGAAAATCAGCCTGGAATTTCAGCAAGAACTTGAACATCTGTGCAGTAATCATGCGCATTGGCGTCGGAAAGGAGTTGCCCGTTATTCCGACAGATTTATCGGACGAGGGGAAAGATTTTCTAGAAAAATGTTTTATAAAGGATCCTACTAAAAGATGGAGCGCTCAAATGCTACTGAATCATCCATTTGTGGCGGATGATCCTGTTCCATCGAAGCAACCTATGGAGTCATCGCCGTCGCCGAGATCTCCCTTCGAATTGCCGCATTGGGCCTCCCATTCGTTCATGGAAATTCCAATGGAATCTGATCGGCAATTCGAGACAGAACTGAATTTGTGCTTGGCTTCTCCGGCGGACAGGTTTCGGCTACTAGCTACGGCGGATGTGCCATCTGATTGGTCGGTTTCCGAGAGTTGGGTCAGCATCAGGTGA 1041 50.05 MDWVRGRKLGSGAFATVYLAGKRDDSHLFPPLMAVKSSEFSFSQSLRHEREVLRRLDSCPEIIRCFGDDITVERDEKLYNLVLEYASGGSLVDQLDKYGGRLPESLVRRYTRGILKGLDFIHSKGFVHCDIKLGNILVVDNGDVKIADFGLAKMPGQEISTEEGNFELRGTPLSIAPESVTDNEYESPCDIWALACAVVEMFTGKSAWNFSKNLNICAVIMRIGVGKELPVIPTDLSDEGKDFLEKCFIKDPTKRWSAQMLLNHPFVADDPVPSKQPMESSPSPRSPFELPHWASHSFMEIPMESDRQFETELNLCLASPADRFRLLATADVPSDWSVSESWVSIR 346
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 25571297 25572337 - Bpe012447.1 Bpe03g00537 101042
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe03g00537 346 SUPERFAMILY Protein kinase-like (PK-like) 2 305 IPR011009 -
Bpe03g00537 346 ProSitePatterns Protein kinases ATP-binding region signature. 9 36 IPR017441 GO:0005524
Bpe03g00537 346 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 1 302 - -
Bpe03g00537 346 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 20 1 302 - -
Bpe03g00537 346 Gene3D Transferase(Phosphotransferase) domain 1 2 314 - -
Bpe03g00537 346 CDD STKc_MAPKKK 2 267 - -
Bpe03g00537 346 SMART serkin_6 3 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe03g00537 346 Pfam Protein kinase domain 5 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe03g00537 346 ProSiteProfiles Protein kinase domain profile. 3 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe03g00537 346 ProSitePatterns Serine/Threonine protein kinases active-site signature. 126 138 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe03g00531 Bpe-Chr3:25426126 Bpe03g00537 Bpe-Chr3:25571297 0 dispersed
Bpe03g00537 Bpe-Chr3:25571297 Bpe13g00095 Bpe-Chr13:6245094 0 dispersed
Bpe03g00532 Bpe-Chr3:25436659 Bpe03g00537 Bpe-Chr3:25571297 0 proximal
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63238 PF00069 Pkinase 5.10E-54 CL0016 Bpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe03g00537 - - zju:107424505 390.193