Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe03g00545 ATGGTTGATCAGGTGCAACACCCCAATGTTGTTCAGAAGGTTGCTGGCCAGCTCCACCTTCGCTCTTCACTCACTTCACATTATCAGAGTTATGAGGGTGTTTTCCAAAGACCTGCTATGTACCAAATGCGTGCCACATTTGGAAATTACTCGAACGCTGCAATGGCATCGTCTTGCAGAACGCCAACTGATCTTTTTAGTGTTGCGACAACTGCCTCTCCCATATTTGTCCCGGCACCAGCAGAGAAAAGCAGCTTTCTTGTTGATTTCCTTATGGGTGGAGTTTCTGCTGCTGTATCAAAGACAGCTGCTGCTCCAATTGAGCGTGTCAAGCTTTTAATTCAAAATCAGGATGAGATGATCAAATCTGGCAGACTTTCTGAACCATACAAGGGCATTGGTGATTGTTTCAGCCGAACAATGAAAGATGAGGGTGTGGTCGCCCTGTGGAGGGGGAATACTGCTAATGTCATCCGTTACTTCCCCACTCAGGCTCTGAATTTTGCATTCAAGGACTACTTTAAGAGGCTTTTCAACTTTAAGAAGGATAAGGATGGATACTGGAAATGGTTTGCTGGAAACTTGGCTTCAGGTGGTGCAGCTGGGGCTTCATCCCTTCTCTTTGTCTACTCCCTTGACTATGCGCGTACCCGATTGGCCAACGATGCCAAAGCTGCAAAGAAAGGAGGGGAAAGACAATTTAATGGGCTGATTGATGTCTACAAGAAGACGATACAATCTGATGGTGTCGCTGGGCTTTACCGTGGATTCAACATTTCATGTGTTGGGATCATCGTTTATCGGGGTCTTTACTTTGGAATGTATGATTCTCTGAAGCCAGTCTTGTTGACTGGAAAGTTGCAGGATAGCTTCTTTGCTAGCTTCGCCCTTGGTTGGCTCATTACCAATGGTGCTGGACTTGCATCATACCCAATTGACACTGTTCGTAGAAGAATGATGATGACTTCTGGTGAAGCAGTGAAGTACAAGAGCTCATATGATGCCTTTTCTCAGATTCTGAAGAACGAGGGTGCTAAGTCTCTCTTCAAGGGTGCGGGTGCGAATATTCTGCGAGCCGTTGCTGGTGCTGGTGTCCTTGCTGGTTACGATAAGTTGCAGGTACTTGTACTTGGTAAGAAGTATGGATCTGGAGGTGCTTAA 1161 46.08 MVDQVQHPNVVQKVAGQLHLRSSLTSHYQSYEGVFQRPAMYQMRATFGNYSNAAMASSCRTPTDLFSVATTASPIFVPAPAEKSSFLVDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSEPYKGIGDCFSRTMKDEGVVALWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDKDGYWKWFAGNLASGGAAGASSLLFVYSLDYARTRLANDAKAAKKGGERQFNGLIDVYKKTIQSDGVAGLYRGFNISCVGIIVYRGLYFGMYDSLKPVLLTGKLQDSFFASFALGWLITNGAGLASYPIDTVRRRMMMTSGEAVKYKSSYDAFSQILKNEGAKSLFKGAGANILRAVAGAGVLAGYDKLQVLVLGKKYGSGGA 386
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 25727431 25728991 - Bpe012454.1 Bpe03g00545 101050
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe03g00545 386 ProSiteProfiles Solute carrier (Solcar) repeat profile. 289 375 IPR018108 -
Bpe03g00545 386 PANTHER ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED 2 386 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Bpe03g00545 386 ProSiteProfiles Solute carrier (Solcar) repeat profile. 189 281 IPR018108 -
Bpe03g00545 386 SUPERFAMILY Mitochondrial carrier 83 371 IPR023395 -
Bpe03g00545 386 PANTHER ADP,ATP CARRIER PROTEIN 1, MITOCHONDRIAL-LIKE 2 386 - -
Bpe03g00545 386 Pfam Mitochondrial carrier protein 290 376 IPR018108 -
Bpe03g00545 386 Pfam Mitochondrial carrier protein 188 284 IPR018108 -
Bpe03g00545 386 Pfam Mitochondrial carrier protein 84 181 IPR018108 -
Bpe03g00545 386 Gene3D Mitochondrial carrier domain 87 382 IPR023395 -
Bpe03g00545 386 PRINTS Adenine nucleotide translocator signature 86 98 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Bpe03g00545 386 PRINTS Adenine nucleotide translocator signature 130 151 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Bpe03g00545 386 PRINTS Adenine nucleotide translocator signature 189 202 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Bpe03g00545 386 PRINTS Adenine nucleotide translocator signature 163 175 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Bpe03g00545 386 PRINTS Adenine nucleotide translocator signature 294 310 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Bpe03g00545 386 ProSiteProfiles Solute carrier (Solcar) repeat profile. 84 177 IPR018108 -
Bpe03g00545 386 PRINTS Mitochondrial carrier protein signature 102 116 IPR002067 GO:0055085
Bpe03g00545 386 PRINTS Mitochondrial carrier protein signature 298 320 IPR002067 GO:0055085
Bpe03g00545 386 PRINTS Mitochondrial carrier protein signature 204 222 IPR002067 GO:0055085
Bpe03g00545 386 PRINTS Mitochondrial carrier protein signature 152 172 IPR002067 GO:0055085
Bpe03g00545 386 PRINTS Mitochondrial carrier protein signature 254 272 IPR002067 GO:0055085
Bpe03g00545 386 PRINTS Mitochondrial carrier protein signature 89 102 IPR002067 GO:0055085
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe03g00545 Bpe-Chr3:25727431 Bpe12g00255 Bpe-Chr12:2418066 0 dispersed
Bpe10g00552 Bpe-Chr10:12565248 Bpe03g00545 Bpe-Chr3:25727431 0 wgd
Bpe11g00092 Bpe-Chr11:633404 Bpe03g00545 Bpe-Chr3:25727431 0 wgd
Bpe03g00545 Bpe-Chr3:25727431 Bpe06g00632 Bpe-Chr6:17099667 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe03g00545 K05863 - zju:107417672 650.588