Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe03g00570 ATGGTTGTCATTTTATCCACAGGACACATCTCAGGAGCTCATTTAAATCCCGCAATCACCATTTCCTTTGCTGCCTTAAAGCATTTCCCATGGAAACATGTTCCGGCATATATTGGAGCACAGGTGGTTGCCTCTTTGTGTGCCGCATTTGCATTAGATGTGATTTTCCACCCTGTCATGGGCGGGGGAGTTACAGTTCCTTCAGGAGGAGTTGGTCAAGCTTTTGCTTTGGAATTTGTCATCAGCTTCAACCTCATGTTTGTTGTCACTGCAGTGGCCACTGATACAAAAGCTGTGGGAGAGCTGGCCGGAATCACAGTAGGAGCTACTGTCATGCTCAATGTGCTAATTGCTGGGGAAACATCTGGAGCGTCAATGAACCCTGTGAGGACACTTGGACCGGCCATAGTAACACACAACTATAAAGCCATATGGGTTTACCTTACTGCTCCTTTCCTCGGGGCGCTGCTCGGCGCTGGAACTTATTCTGCCGTAAAGATGCCAGAAAAATAA 513 47.56 MVVILSTGHISGAHLNPAITISFAALKHFPWKHVPAYIGAQVVASLCAAFALDVIFHPVMGGGVTVPSGGVGQAFALEFVISFNLMFVVTAVATDTKAVGELAGITVGATVMLNVLIAGETSGASMNPVRTLGPAIVTHNYKAIWVYLTAPFLGALLGAGTYSAVKMPEK 170
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 25999182 26000118 - Bpe012479.2 Bpe03g00570 101075
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe03g00570 170 ProSitePatterns MIP family signature. 14 22 IPR022357 -
Bpe03g00570 170 PANTHER MAJOR INTRINSIC PROTEIN (MIP) FAMILY TRANSPORTER 1 170 - -
Bpe03g00570 170 Pfam Major intrinsic protein 2 162 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bpe03g00570 170 PRINTS Major intrinsic protein family signature 145 165 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bpe03g00570 170 PRINTS Major intrinsic protein family signature 33 52 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bpe03g00570 170 PRINTS Major intrinsic protein family signature 77 95 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bpe03g00570 170 PRINTS Major intrinsic protein family signature 108 130 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bpe03g00570 170 Gene3D Glycerol uptake facilitator protein. 1 170 IPR023271 -
Bpe03g00570 170 PANTHER AQUAPORIN NIP2-1 1 170 IPR034294 -
Bpe03g00570 170 SUPERFAMILY Aquaporin-like 1 168 IPR023271 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe03g00570 Bpe-Chr3:25999182 Bpe08g00926 Bpe-Chr8:11702158 1.51E-84 dispersed
Bpe03g00570 Bpe-Chr3:25999182 Bpe09g00441 Bpe-Chr9:11404443 1.46E-108 wgd
Bpe03g00570 Bpe-Chr3:25999182 Bpe09g00441 Bpe-Chr9:11404443 1.46E-108 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe03g00570 K09874 - pop:7487062 293.893