Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe03g00573 TTGGTGGAGGAATTGAACAGGGCGAGCGAACAAAATAAGAGATTGACTGAACTACTAACAGTCATGTACGAGAATTACAATGCATTGAAGACCCAGTTGGTAGATTTTATGAGCAAAAACTCGGACAAGGACCTTAGCCCGTCGAAGAAAAGAAAATCAGAAAGCAGCGACAACAACAACATCAGCAATATTGTCGGGATTGACGCAAATTCCGACGCCAGCTCCAGCGACGAGGAATCATGCAAGAAACCCAGAGAAGAAACAATCAAATCCAGAATCAGAAAAGCTTATTACAAGACTGAACCTTCTGATACGAGCCTGATTGTGAAAGATGGGTATCAATGGAGGAAATATGGGCAAAAAGTGACGAGGGATAATCCTTGCCCAAGAGCTTATTTCAAATGCTCTTTTGCTCCTGGCTGTCCAGTCAAAAAGAAGGTGCAAAGAAGTGCGGAAGATCAGTCTGTTTTGGTAGCAACTTATGAAGGACAACACAACCATCCAAACTCTTCTCCAATGGAGGTGAACTCAACCTCAACACGACGTTCGGTCCCTCTTTCGAGCTCTCTCTGCTCGTCAGGACCGTCCATCAATCTAGACCTCGTGAAATCGAAGACCATTAACGAAGCAAAAGCTTTGGAAGGCAGAACTGCTACGCCTGAAATGCAGCAGTTTCTGGTAGAGCAGATGGCTTCTTCTTTGACAAAAGATCCTAACTTCACAGCAGCATTGGCGGCAGCCATATCTGGAAGAATGTTTTCGAGATAA 768 44.4 LVEELNRASEQNKRLTELLTVMYENYNALKTQLVDFMSKNSDKDLSPSKKRKSESSDNNNISNIVGIDANSDASSSDEESCKKPREETIKSRIRKAYYKTEPSDTSLIVKDGYQWRKYGQKVTRDNPCPRAYFKCSFAPGCPVKKKVQRSAEDQSVLVATYEGQHNHPNSSPMEVNSTSTRRSVPLSSSLCSSGPSINLDLVKSKTINEAKALEGRTATPEMQQFLVEQMASSLTKDPNFTAALAAAISGRMFSR 255
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 26019373 26020317 + Bpe012482.1 Bpe03g00573 101078
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe03g00573 255 ProSiteProfiles WRKY domain profile. 104 170 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bpe03g00573 255 SMART WRKY_cls 109 169 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bpe03g00573 255 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 1 254 IPR044810 GO:0003700
Bpe03g00573 255 Pfam WRKY DNA -binding domain 110 168 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bpe03g00573 255 PANTHER WRKY TRANSCRIPTION FACTOR 40-RELATED 1 254 - -
Bpe03g00573 255 SUPERFAMILY WRKY DNA-binding domain 106 169 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bpe03g00573 255 Gene3D WRKY domain 90 170 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bpe03g00573 255 MobiDBLite consensus disorder prediction 39 86 - -
Bpe03g00573 255 MobiDBLite consensus disorder prediction 57 74 - -
Bpe03g00573 255 MobiDBLite consensus disorder prediction 42 56 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g00538 Bpe-Chr2:3480779 Bpe03g00573 Bpe-Chr3:26019373 8.20E-48 dispersed
Bpe02g01261 Bpe-Chr2:16069141 Bpe03g00573 Bpe-Chr3:26019373 3.13E-64 dispersed
Bpe03g00573 Bpe-Chr3:26019373 Bpe04g00080 Bpe-Chr4:614055 4.18E-58 dispersed
Bpe03g00573 Bpe-Chr3:26019373 Bpe06g00676 Bpe-Chr6:17397300 2.33E-93 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
21100 PF03106 WRKY 7.80E-24 CL0274 Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe03g00573 - - rcu:8279744 340.502