Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bpe03g00573 | TTGGTGGAGGAATTGAACAGGGCGAGCGAACAAAATAAGAGATTGACTGAACTACTAACAGTCATGTACGAGAATTACAATGCATTGAAGACCCAGTTGGTAGATTTTATGAGCAAAAACTCGGACAAGGACCTTAGCCCGTCGAAGAAAAGAAAATCAGAAAGCAGCGACAACAACAACATCAGCAATATTGTCGGGATTGACGCAAATTCCGACGCCAGCTCCAGCGACGAGGAATCATGCAAGAAACCCAGAGAAGAAACAATCAAATCCAGAATCAGAAAAGCTTATTACAAGACTGAACCTTCTGATACGAGCCTGATTGTGAAAGATGGGTATCAATGGAGGAAATATGGGCAAAAAGTGACGAGGGATAATCCTTGCCCAAGAGCTTATTTCAAATGCTCTTTTGCTCCTGGCTGTCCAGTCAAAAAGAAGGTGCAAAGAAGTGCGGAAGATCAGTCTGTTTTGGTAGCAACTTATGAAGGACAACACAACCATCCAAACTCTTCTCCAATGGAGGTGAACTCAACCTCAACACGACGTTCGGTCCCTCTTTCGAGCTCTCTCTGCTCGTCAGGACCGTCCATCAATCTAGACCTCGTGAAATCGAAGACCATTAACGAAGCAAAAGCTTTGGAAGGCAGAACTGCTACGCCTGAAATGCAGCAGTTTCTGGTAGAGCAGATGGCTTCTTCTTTGACAAAAGATCCTAACTTCACAGCAGCATTGGCGGCAGCCATATCTGGAAGAATGTTTTCGAGATAA | 768 | 44.4 | LVEELNRASEQNKRLTELLTVMYENYNALKTQLVDFMSKNSDKDLSPSKKRKSESSDNNNISNIVGIDANSDASSSDEESCKKPREETIKSRIRKAYYKTEPSDTSLIVKDGYQWRKYGQKVTRDNPCPRAYFKCSFAPGCPVKKKVQRSAEDQSVLVATYEGQHNHPNSSPMEVNSTSTRRSVPLSSSLCSSGPSINLDLVKSKTINEAKALEGRTATPEMQQFLVEQMASSLTKDPNFTAALAAAISGRMFSR | 255 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 26019373 | 26020317 | + | Bpe012482.1 | Bpe03g00573 | 101078 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bpe03g00573 | 255 | ProSiteProfiles | WRKY domain profile. | 104 | 170 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Bpe03g00573 | 255 | SMART | WRKY_cls | 109 | 169 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Bpe03g00573 | 255 | PANTHER | WRKY TRANSCRIPTION FACTOR 36-RELATED | 1 | 254 | IPR044810 | GO:0003700 | |
Bpe03g00573 | 255 | Pfam | WRKY DNA -binding domain | 110 | 168 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Bpe03g00573 | 255 | PANTHER | WRKY TRANSCRIPTION FACTOR 40-RELATED | 1 | 254 | - | - | |
Bpe03g00573 | 255 | SUPERFAMILY | WRKY DNA-binding domain | 106 | 169 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Bpe03g00573 | 255 | Gene3D | WRKY domain | 90 | 170 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Bpe03g00573 | 255 | MobiDBLite | consensus disorder prediction | 39 | 86 | - | - | |
Bpe03g00573 | 255 | MobiDBLite | consensus disorder prediction | 57 | 74 | - | - | |
Bpe03g00573 | 255 | MobiDBLite | consensus disorder prediction | 42 | 56 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bpe02g00538 | Bpe-Chr2:3480779 | Bpe03g00573 | Bpe-Chr3:26019373 | 8.20E-48 | dispersed | |
Bpe02g01261 | Bpe-Chr2:16069141 | Bpe03g00573 | Bpe-Chr3:26019373 | 3.13E-64 | dispersed | |
Bpe03g00573 | Bpe-Chr3:26019373 | Bpe04g00080 | Bpe-Chr4:614055 | 4.18E-58 | dispersed | |
Bpe03g00573 | Bpe-Chr3:26019373 | Bpe06g00676 | Bpe-Chr6:17397300 | 2.33E-93 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
21100 | PF03106 | WRKY | 7.80E-24 | CL0274 | Bpe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bpe03g00573 | - | - | rcu:8279744 | 340.502 |