Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bpe03g00575 | ATGGCGGATCTCGAAGAACGATTGCTTCCTCCTAGAGCTGCATCCGCCATTACCCTTGGGGAGTCATCTCATCGACCATCTTCCTCTGGAAGGCCACCTTTTCAAGGGCTGGATCTATCTGGATTGAAGAAACGAGGTCAAGGAGCTCGGTCTTGGATTCAGGTTGACTTATCTGGGAACTCTCAATGTATTGAGGTTGATAAGTTTACCATGATGCGACGTTGCGATCTTCCTGCTCGTGATTTGCGGCTGCTAGATCCTTTATTAGTCTATCCAACTACAATACTTGGCAGGGAGAAGGCTATTGTCGTTAATCTGGAGCAAATTCGATGCATTATCACTGCAGACGAGGTTCTCTTGTTGAATTCACTTGATAGTTATGTTCTTCAATATGCAGAAGAACTTCAACGGCGACTAATAGCTAATGGGACTGGTGAGGTTTGGCAATCAGAAGGTCTTGACTTGAACTGGAGGAGGGGAGGTAGCAACTTTGATAATGCGCGTCGTAGCACATCACCTGATTACTTGCCGTTTGAGTTTAGGGCTCTAGAAGTTGCTCTTGAAACTGCTTGTACGTTTCTTGATTCCCAGGCAGCAGAATTAGAATCTGAAGCACACCCATTGTTAGATGAACTCATATCAAAGATCAGTACATTAAATTTGGAGCGTGTGAGGAGATTGAAAAGCAGACTTGTTGCCTTGACTCGTAGAGTTCAGAATGTTAGGGACAAAATAGAGCAAGTCATGGAGGATGATGGCAATATGGCTGAAATGTATCTCACGGAAAAGAAAAGGCGGATGGAGGCTTCATTTTACGGTGATCAGTCTTTGATGCCATACAAATCGACTGATGGAGCTTCAGCTTCTGCGCCTGCTTCGCCTGTATCCGCCCTTCCTGGAGCCAGAAAGCTGGAGAAGAGCTTGAGTATTGCTAGAAGTCAACATGAGACCGCAAGGAGTTCAGAAAGTGCTACTGATAGTATAGCAGAGCTTGAGATGTTGTTGGAAGCATATTTTGTTGTCATTGATAACACCTTTAATAAATTGACGTCATTGAAAGAGTTCATCGATTACACTGAAGATTTCATCAACATTCAGCTGGATAATGTAAGGAACCAGCTGATCCAGTTTGAGCTACTACTCACAACGGCAACCTTCGTGGTTGCCATCTTCGGGATGGTTGCAGGGATCTTTGGTATGAACTTCTCAATACCGCTTTTTGACAACGAAGGTGCATTTAAGTGGGTTCTTGTAATCACAGGAGTAACTGGTATATGCATTTTTTCTGCGTTTCTTTGGTTTTTCAAAAATAGAAGCCTCATGGCATTGTAG | 1332 | 43.77 | MADLEERLLPPRAASAITLGESSHRPSSSGRPPFQGLDLSGLKKRGQGARSWIQVDLSGNSQCIEVDKFTMMRRCDLPARDLRLLDPLLVYPTTILGREKAIVVNLEQIRCIITADEVLLLNSLDSYVLQYAEELQRRLIANGTGEVWQSEGLDLNWRRGGSNFDNARRSTSPDYLPFEFRALEVALETACTFLDSQAAELESEAHPLLDELISKISTLNLERVRRLKSRLVALTRRVQNVRDKIEQVMEDDGNMAEMYLTEKKRRMEASFYGDQSLMPYKSTDGASASAPASPVSALPGARKLEKSLSIARSQHETARSSESATDSIAELEMLLEAYFVVIDNTFNKLTSLKEFIDYTEDFINIQLDNVRNQLIQFELLLTTATFVVAIFGMVAGIFGMNFSIPLFDNEGAFKWVLVITGVTGICIFSAFLWFFKNRSLMAL | 443 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 26022567 | 26024945 | - | Bpe012484.1 | Bpe03g00575 | 101080 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bpe03g00575 | 443 | SUPERFAMILY | Magnesium transport protein CorA, transmembrane region | 380 | 432 | IPR045863 | - | |
Bpe03g00575 | 443 | MobiDBLite | consensus disorder prediction | 1 | 37 | - | - | |
Bpe03g00575 | 443 | CDD | Mrs2_Mfm1p-like | 52 | 440 | IPR039204 | - | |
Bpe03g00575 | 443 | Gene3D | Magnesium transport protein CorA, transmembrane region | 130 | 374 | - | - | |
Bpe03g00575 | 443 | Gene3D | - | 37 | 123 | - | - | |
Bpe03g00575 | 443 | PANTHER | MAGNESIUM TRANSPORTER MRS2-10 | 3 | 443 | - | - | |
Bpe03g00575 | 443 | MobiDBLite | consensus disorder prediction | 20 | 34 | - | - | |
Bpe03g00575 | 443 | PANTHER | RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL | 3 | 443 | IPR039204 | - | |
Bpe03g00575 | 443 | Coils | Coil | 224 | 251 | - | - | |
Bpe03g00575 | 443 | Gene3D | Magnesium transport protein CorA, transmembrane region | 381 | 440 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bpe03g00575 | Bpe-Chr3:26022567 | Bpe13g01373 | Bpe-Chr13:18972938 | 1.11E-143 | dispersed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bpe03g00575 | K16075 | - | zju:107406606 | 677.552 |