Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe03g00637 ATGGGCGTGGACATGTCGAATAATCAACCGACTTCACGAACCAAGGACTTTTTTGCCTCTCCTGCTCTCTCTCTCAGTCTTGCCGGGATTTTTCGTGATGCCGGAGGGACAGCTGCAGCTGCCAGTGTGGAGGTGGAAGAAGGAGACGAGGAGAGCGGGGGAGGAGGCCGTAGAGAAGATACGGTGGAGATTAGTAGTGAGAATTCGGGTCCCGGTAGATCAAGATCGGAAGGTGAATTTGATCCCGAGGGAGAACATGATGACGAGGATGAAGATGGAGACAAGAATAAGAAGAAGAAAAGGAAGAAGTACCATAGGCATACAGCAGAGCAAATCCGAGAAATGGAAGCGCTATTCAAAGAGTCGCCTCATCCAGATGAGAAGCAGAGGCAGCAACTGAGCAAGCAACTAGGCTTAGCTTCAAGACAAGTCAAATTCTGGTTCCAGAATAGAAGAACACAAATCAAAGCGATTCAAGAGCGCCATGAAAACACGTTACTGAAAACGGAGATGGAGAAGCTGAGAGACGAAAATAAATCGATGAGAGAGTCGATAAACCGATCCTCTTGTCCTAATTGTGGCACTGCAACTACTAGTAGGGACACTGCCTTGACTACTGAGGAGCAACAGCTTCGGCTCGAAAATGCAAAACTCAAAGCCGAGGTGGAAAAACTGAAAAATGCTCTCGGAAGATACCCTCCAGGGGGGACATCATCTCCGTCGTGTTCAGCCGGCAACGATCAAGAAAACCGAAGCTCCTTGGACTTCTACACTGGGATTTTCGGACTTGAGAAGTCGAGAATCATAGAAATAGTCAATCAAGCAATGGACGAGCTAGAAAAGATGGCCACAGCCGGAGAACCACTTTGGATTCGGAGTGTCGAGACCGGGCGTGAAATACTAAATTATGACGAGTACATGAAGGAATTCTCCGTCAATAACTCCAGCAACGGTAGGCCCAAGCGATCCATCGAGGCCTCCAGAGAGACCGGAATTGTCTTCCTAGACCTATCGCGACTAGTGCAGAGTTTCGTCGATGTGAATCAGTGGAAGGAAATGTTTCCATTTATGATCTCAAAAGCCGCTACAGTTGACATTATCAGCCATGGCGAAGGTCCAAACAAGAATGGATCAGTTCAGCTGATGTTTGCCGAGCTGCAAATGCTTACTCCGTTGGTGGGCACAAGAGAGGTCTACTTTATCAGATACTGCAAGCAGTCGAGCCCGGAACAGTGGGCAATTGTCGACGTCTCCATCGACAAAGTCGAAGATAGCATTGATGCTTCGTTAGTGAAATGCCGGAAGCGTCCATCTGGTTGCATCATCGAAGATAAATCAAATGGTCACTGCAAGGTGATTTGGGTGGAGCATTTAGAGTGCCAGAAAAACACAGTTCATACCATGTACCGAACAGTCGTTAACAGCGGTTTGGCCTTTGGGGCGAGACACTGGATGGCTACGCTCCAGCTGCAATGCGAGCGGCTTGTTTTTTTCATGGCCACCAACGTTCCCATGAAGGATTCTACAGGAGTTTCCACTTTGGCTGGGAGGAAAAGCATACTGAAGTTGGCTCAAAGAATGACATGTAGCTTTAGTCACGCCATTGGAGCCTCAAGCTTCAACACATGGAATAAGGTATCAAGCAAGACAGGGGAAGACATAAGAATTGCTTCTAGAAAGAACTTGAACGACCCGGCTGAGCCTCTGGGATTGATCTTATGCGCAGTTTCATCTGTCTGGCTTCCGGTGTCCCCTCTCGTTTTGTTTGATTTCTTACGAGATGAAACTCACCGAAACGAGTGGGATATCATCTTCACCGGAGGCCAAGCGCAATCCATCGCTAACTTATCCAAAGGCCAAGATCGAGGCAATGCAGTTGCTATCCAAACGATAAAATCGAAAGAGACTAGCATGTGGATACTCCAAGACAGCTGCACAAACACATTCGAATCCTTGGTGGTCTATGCTCAAGTAGACATCACAGGCATGCAGTCAGTAATGACAGGCTGCGACTCTAGCAACATCGCAGTGTTGCCTTCCGGTTTCTCGATTCTCCCGGATGGGCTCGAATCGAGACCTCTAGTCATTACTTCGAGGAGAGAGGAGAAGAGTTCAGAAGGAGGGTCTTTGCTCACAATAGCATTCCAAATCCTCACCAACACCTCTCCTACTGCCAAACTAACGATGGAGTCAGTCGAGTACGTCAACAACGTCATCTCATGTACTTTGAGAAATATTAGAACAAGCTTGCAGTGCGAAGATGGGTGA 2268 47.8 MGVDMSNNQPTSRTKDFFASPALSLSLAGIFRDAGGTAAAASVEVEEGDEESGGGGRREDTVEISSENSGPGRSRSEGEFDPEGEHDDEDEDGDKNKKKKRKKYHRHTAEQIREMEALFKESPHPDEKQRQQLSKQLGLASRQVKFWFQNRRTQIKAIQERHENTLLKTEMEKLRDENKSMRESINRSSCPNCGTATTSRDTALTTEEQQLRLENAKLKAEVEKLKNALGRYPPGGTSSPSCSAGNDQENRSSLDFYTGIFGLEKSRIIEIVNQAMDELEKMATAGEPLWIRSVETGREILNYDEYMKEFSVNNSSNGRPKRSIEASRETGIVFLDLSRLVQSFVDVNQWKEMFPFMISKAATVDIISHGEGPNKNGSVQLMFAELQMLTPLVGTREVYFIRYCKQSSPEQWAIVDVSIDKVEDSIDASLVKCRKRPSGCIIEDKSNGHCKVIWVEHLECQKNTVHTMYRTVVNSGLAFGARHWMATLQLQCERLVFFMATNVPMKDSTGVSTLAGRKSILKLAQRMTCSFSHAIGASSFNTWNKVSSKTGEDIRIASRKNLNDPAEPLGLILCAVSSVWLPVSPLVLFDFLRDETHRNEWDIIFTGGQAQSIANLSKGQDRGNAVAIQTIKSKETSMWILQDSCTNTFESLVVYAQVDITGMQSVMTGCDSSNIAVLPSGFSILPDGLESRPLVITSRREEKSSEGGSLLTIAFQILTNTSPTAKLTMESVEYVNNVISCTLRNIRTSLQCEDG 755
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 26570019 26573314 - Bpe012550.1 Bpe03g00637 101142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe03g00637 755 Pfam START domain 271 494 IPR002913 GO:0008289
Bpe03g00637 755 ProSiteProfiles 'Homeobox' domain profile. 98 158 IPR001356 GO:0003677
Bpe03g00637 755 Coils Coil 157 184 - -
Bpe03g00637 755 ProSitePatterns 'Homeobox' domain signature. 133 156 IPR017970 GO:0000981|GO:0006355
Bpe03g00637 755 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN GLABRA 2 16 752 - -
Bpe03g00637 755 MobiDBLite consensus disorder prediction 228 248 - -
Bpe03g00637 755 CDD START_ArGLABRA2_like 265 493 - -
Bpe03g00637 755 MobiDBLite consensus disorder prediction 234 248 - -
Bpe03g00637 755 Gene3D - 270 489 IPR023393 -
Bpe03g00637 755 Pfam Homeodomain 101 156 IPR001356 GO:0003677
Bpe03g00637 755 Gene3D - 86 171 - -
Bpe03g00637 755 SUPERFAMILY Homeodomain-like 90 159 IPR009057 -
Bpe03g00637 755 MobiDBLite consensus disorder prediction 182 205 - -
Bpe03g00637 755 Coils Coil 208 228 - -
Bpe03g00637 755 ProSiteProfiles START domain profile. 261 497 IPR002913 GO:0008289
Bpe03g00637 755 SUPERFAMILY Bet v1-like 263 494 - -
Bpe03g00637 755 MobiDBLite consensus disorder prediction 35 109 - -
Bpe03g00637 755 SMART HOX_1 100 162 IPR001356 GO:0003677
Bpe03g00637 755 MobiDBLite consensus disorder prediction 184 205 - -
Bpe03g00637 755 CDD homeodomain 105 156 IPR001356 GO:0003677
Bpe03g00637 755 SUPERFAMILY Bet v1-like 538 742 - -
Bpe03g00637 755 SMART START_1 270 494 IPR002913 GO:0008289
Bpe03g00637 755 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 16 752 IPR042160 -
Bpe03g00637 755 MobiDBLite consensus disorder prediction 50 64 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe03g00637 Bpe-Chr3:26570019 Bpe14g00999 Bpe-Chr14:7375836 0 dispersed
Bpe11g00813 Bpe-Chr11:6065519 Bpe03g00637 Bpe-Chr3:26570019 2.85E-24 dispersed
Bpe03g00637 Bpe-Chr3:26570019 Bpe05g00780 Bpe-Chr5:21118981 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
21103 PF01852 START 3.80E-55 CL0209 Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe03g00637 K09338 - qsu:111988083 1235.71