Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe03g00643 ATGGCGGCGCTGCAACGCTTCCTCTTCCTCTCCTTCCTCGCTTCTTTCTCTTTCCTTGTTTCTGTCCATGCACAGACACAGACAGGTTTCATCAGTATAGACTGTGGGCTAGCCGGAAATTCGAGCTACACAGAACCCTTAACCGGCCTTACCTACGTCGGAGACTCATCATACATAGACACTGGAGAGACGACGACCGTGTCTGATACCTACAAGACAGATACTCTTCTGCAACAGCTCGCAACTGCCAGAACGTTTCCTCAAGGGACCAGAAACTGCTACAAAGTCAACGTGAAAGTTGGTACCAGATATCTGATCAGAGCTAGCTTCCTCTACGCAAATTTTGACGGGAAAAACACGACGCCTGGGACCTTTGATCTTCACTACGGTCCTAATTACTGGGCGACTGTGTCTTTACAAAGAGTTGCTTCCATCCTTCACGAGGAAATCATACACATCTCCACCTCAAGTTATGCCCAAGTCTGCCTTGTTAAAACTGGGTCTACAACTCCATTTATATCGTCTCTAGAATTCAGACCCATCCCGAACATCACCTACAGCGCTATCACACAAACGCTGCAACTGTTCTTGCGGTTCGATCTCGGCTCCTACAGCTCGATGTCTTACAGGTTCCCATCTGATATTTACGATCGAACCTGGTTGCCGATACCTGTATTCTCAGATTGGACTACGATTAATACTACATCTACTGTAACCGTGACCGATCCTGGCGGCTATAATGCGCCGTCTGTGGTGATGAGTACAGCTTTCACGGTAAACCAAAGCGCCTCGGCTATGGATTTCAACTTCAACTCTGCAACTTCGAATTCTCAATATGGTGTGTACATGTACTTTGCTGAACTAGTAAAGCTCCAACCCAACCAGTCCAGATCGTTCGACATTTATCTAAATGGAGCGCGTTTTTTAACTCAACCTCTTACGCCAGAGTATCTCAACGAAATCGTGGCCTATACAACCAATACTATTACTAATTCATCTTTTTTCTTTTCCCTGAATAAAACTGCGACCTCTACCCTTCCCCCAATCCTGAACGCCATTGAGATTTACTCTATTCTTAGTTTGTCACAATCTGCAACCGATCAACAAGATGTTGATGCCATCACGAGCATTCAGTCCAGTTATGGAGTTCTGAGAAACTGGCAAGGAGATCCTTGTGCTCCTAAAGAATATGTTTGGACTGGTCTTGTCTGCGATTATGGTACCACCAATGCTCCTCCTAGAATTACATCTTTGGTCCTTTCGTCGAGCGGATTGACGGGTCAAATATCGCTCGATATTTTGGATCTTAAAATGCTCGATACCCTAGATCTGTCAAATAATAGCTTAACTGGATCAATTCCTGATTTTCTCTCTCAGTTGCCATTATTGAAAGTTCTAAACTTGGAGAAGAACAACCTTTCGGGTTCGATTCCTGCTTCGCTCCTCGAAAAGTCTAAGAATGGCTCTCTCTCATTAAGCCTGGGAGACAATCCGAATTTACCTGTGACGGCGATAACGGCAACTCCAAGCACGGAAAAGAAGAAGAGCAGTGTTGTCATTCCTATAGTGGCATCAATTGTCGGAGTTGTTGTCGTGGTTCTTTTAGTTGTTGGTATAATCTTTTGGATACGTCGAAGGAGGGAACCAAGAGGAGCTGCAACCGGGAGGGTGGAAGTGACACCGACCAACAGTCAGACAGAACCGTGGGAGATGCAGAAACACCAGTATTCATACTCAGAAGTGGTAAAAATGACCAGCAATTTCAAGAGGGTGTTGGGAGAAGGAGGGTTCGGAAAAGTTTATTACGGCCAAATCGAAAGCAACAACACTGAAGTCGCCGTCAAAATGCTCTCTTTGTCGTCCAGCCAAGGCTATCAGCAATTTCAGGCCGAGGTGGAGCTTCTTATGAGAGTTCATCACAGAAACTTGATCAGCCTCGTCGGATACTGCAACGAAGGGCAGCATATGGGGCTTATCTATGAATACATGAGCAGAGGCAATTTAGGCTCTCTGTTGGCTGGTGAAAAGGCAAGTTTTTTGACGTGGGAAAGAAGGCTGCATATAGCTCTAGATGCAGCACAAGGATTGGAATATCTGCATAATGGTTCCAGGCCAGCCATGGTGCATAGAGACGTCAAATGTGCAAACATCTTGCTAAACGATATTTTCCAAGCAAAACTTGCTGATTTTGGCCTGTCTAGATCCTTCCCGACCGAGGGTGGTGCCACCCACATCACCACCAATGTCGTCGGAACTCCAGGCTACCTCGATCCCGAATACTATGTATCGTACAGACTGAACGAGAAGAGCGACATATACAGCTTCGGAATCGTGATTCTTGAAATCGTGACGGGTCGGCCGGTTCTCGTGAAGAGTCAAGAGAAGAGCCACATAACTCAGTGGGTGGATTACACGCTGAGTCAGGGAGATATAAGTTCTATAATCGATCCAAGAATGAAGAAGGATTACGATGTCAACTCGATCTGGAAAGCTGTCGAAATTGCCATGTCCTCTGCCTCTCACAGCTCTGCAAGAAGGCCAACCATGAGCGACGTGGTAAGGGAGCTGAAGGAGTGTTTGGATATAGAACTGGCCAACAAAGCCGGTTCTCAGAATCAATCCACTGTTCCCTTGGACAGCGACCTGGGTTCTGAATTCAGCCCCATTGCAAGGTAG 2676 46.26 MAALQRFLFLSFLASFSFLVSVHAQTQTGFISIDCGLAGNSSYTEPLTGLTYVGDSSYIDTGETTTVSDTYKTDTLLQQLATARTFPQGTRNCYKVNVKVGTRYLIRASFLYANFDGKNTTPGTFDLHYGPNYWATVSLQRVASILHEEIIHISTSSYAQVCLVKTGSTTPFISSLEFRPIPNITYSAITQTLQLFLRFDLGSYSSMSYRFPSDIYDRTWLPIPVFSDWTTINTTSTVTVTDPGGYNAPSVVMSTAFTVNQSASAMDFNFNSATSNSQYGVYMYFAELVKLQPNQSRSFDIYLNGARFLTQPLTPEYLNEIVAYTTNTITNSSFFFSLNKTATSTLPPILNAIEIYSILSLSQSATDQQDVDAITSIQSSYGVLRNWQGDPCAPKEYVWTGLVCDYGTTNAPPRITSLVLSSSGLTGQISLDILDLKMLDTLDLSNNSLTGSIPDFLSQLPLLKVLNLEKNNLSGSIPASLLEKSKNGSLSLSLGDNPNLPVTAITATPSTEKKKSSVVIPIVASIVGVVVVVLLVVGIIFWIRRRREPRGAATGRVEVTPTNSQTEPWEMQKHQYSYSEVVKMTSNFKRVLGEGGFGKVYYGQIESNNTEVAVKMLSLSSSQGYQQFQAEVELLMRVHHRNLISLVGYCNEGQHMGLIYEYMSRGNLGSLLAGEKASFLTWERRLHIALDAAQGLEYLHNGSRPAMVHRDVKCANILLNDIFQAKLADFGLSRSFPTEGGATHITTNVVGTPGYLDPEYYVSYRLNEKSDIYSFGIVILEIVTGRPVLVKSQEKSHITQWVDYTLSQGDISSIIDPRMKKDYDVNSIWKAVEIAMSSASHSSARRPTMSDVVRELKECLDIELANKAGSQNQSTVPLDSDLGSEFSPIAR 891
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 26649189 26652821 + Bpe012555.1 Bpe03g00643 101148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe03g00643 891 Gene3D Phosphorylase Kinase; domain 1 573 662 - -
Bpe03g00643 891 Gene3D Ribonuclease Inhibitor 371 493 IPR032675 -
Bpe03g00643 891 SMART serkin_6 586 860 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe03g00643 891 ProSitePatterns Serine/Threonine protein kinases active-site signature. 707 719 IPR008271 GO:0004672|GO:0006468
Bpe03g00643 891 Gene3D Transferase(Phosphotransferase) domain 1 663 880 - -
Bpe03g00643 891 SUPERFAMILY Protein kinase-like (PK-like) 569 861 IPR011009 -
Bpe03g00643 891 SUPERFAMILY L domain-like 382 486 - -
Bpe03g00643 891 Pfam Malectin-like domain 33 358 IPR024788 -
Bpe03g00643 891 PANTHER OS07G0107800 PROTEIN-RELATED 16 891 - -
Bpe03g00643 891 ProSiteProfiles Leucine-rich repeat profile. 438 460 IPR001611 GO:0005515
Bpe03g00643 891 Pfam Protein tyrosine and serine/threonine kinase 588 856 IPR001245 GO:0004672|GO:0006468
Bpe03g00643 891 Gene3D - 193 358 - -
Bpe03g00643 891 PANTHER PUTATIVE-RELATED 16 891 - -
Bpe03g00643 891 MobiDBLite consensus disorder prediction 871 891 - -
Bpe03g00643 891 ProSiteProfiles Protein kinase domain profile. 586 860 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe03g00643 891 ProSitePatterns Protein kinases ATP-binding region signature. 592 615 IPR017441 GO:0005524
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe03g00643 Bpe-Chr3:26649189 Bpe09g00009 Bpe-Chr9:86899 0 dispersed
Bpe03g00642 Bpe-Chr3:26640444 Bpe03g00643 Bpe-Chr3:26649189 1.31E-85 tandem
Bpe10g00676 Bpe-Chr10:13282129 Bpe03g00643 Bpe-Chr3:26649189 2.14E-137 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63242 PF12819 Malectin_like 2.00E-104 CL0202 Bpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe03g00643 - - bhj:120079735 893.649