Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe03g00693 ATGATGTTTCATCCCCAAGGAGCTGCTAGACACACTTGTAGTCTTCTGGCAGTAACTTGTGGAAATGGTCTACAAGAAAAGTATAATAGAGATGTTTTCGAGTATCAGCTTCAGTTTCCTTTCCCGGAGTTAGTTTCTTCCGGCCGTTTAGAGGTCAAGATACTTACTAATCCAAGCAAAAATGAAATTTGTAAAGTTATTGATTCGTACCTACCGAATCTCTTATATTTGCAAGGAGAACAACTTGAAAATGATGAAGTAGGCTCTTTGGTCTTGGCAGATGTGGATTTGTCCTCTGTAGAAGATATTCATGATCTTTTTCGAACCACACTTCCCACCACTGTTTATTTGGAAATCCCAAATGGAGACCAATTGGCTGAAGCACTTCACTCCAAGGGCATTCCTTACGTGATATATTGGAAAAACACATTTTCACGATATACTTCCTGCCACTTTCGTAATGCATTTCTTTCTGTGGTTCAAAGTTCATCCACCCATATATGGGATGCTTTTCAACTTGGGCTGGCATCCTTTAGGATCTACTGTTTGCGAAGCTCCCATGATCGTAGTGATAGACGTAGTGAAGAGCTTGAGCCACATCTTCTTGGGGAGCCGTCTAAGATAAATGTAGAGCCTCCTGAGGTGGAGGTAGGAGAAGATGAAGATGGTTCTCCGCCAACACTTCCCACCATAAACATTCACAATGATGATGTTACCACTAGATTTTTAATTTGCAACGAATCATCTACGGTGGATGAAAGCTTATTGGGATCTTTGGAGGATGGCCTTAATGCCCTCTTAAACATTGAAGTAAGTGAGACGAGACTGAGTTTATACTCACCTTTCAATACTCATTCTGTCTTCTCTGTATCATATAGTGCACCTCCACCATCTCTTCAGGCAGGGACATTTTCTCGTGGTGTTGTGACAATGAGATGTGACTTATCAACTAGTAGTGCTGCCCACATCTCACTTTTGGTGTCTGGTAGTGCACGGACATGTTTTGATGATCAGCTTTTGGAAAATCATATCAAAAATGAAATAATCGAAAATGCTCTTTTAGTTCGCTCTATACTGGACTGTGATGGAAACAAAGTTCCTTTATCTGAACCTCGGAAATCTGAGTCAATCGCTTGTGGTGCAACAGTGTTTGAGGTTTCCATGAAGGTCCCTTCGTGGGCGTTACAGGTGTTGAGGCAGTTGGCACCAGACGTTACTTATCGTAGTTTAGTAGCACTTGGCATTGCAAGTGTTCAGGGATTGCCCGTAGCTTCGTTTGAGAAAGAGGATGCGGAGCGGCTGCTTTTTTTCTGTTCTAGACATGAAAAGGAAATAATTTTAGATGATTTGAGGTTTTCCAGCCCCCCAAGCTGGTTGAAGCCACCAGTGCCTAGCAGAAAGAGATGCCAACTAATCAATGAGAAAATCATCGGTTTATTTGATAGTCCTGCTTATGAAAATATCCTTCCCACCTGCAAAATAAAAGAAGAAAATCAGGATGGTAGCGCAATGAATGGCTTTAAGACGTGTGCTTTACCTGCTCGGCAAAGGTTCAGAGTAGCTGCTTTAAGGCCAATTCCTCGCAGCCATCGACAAAAAATTACACCCTTCTCTGGCATAACCGAGGCAAATGGGCAAAATGGAGGCCAGATTAAAGCTAATATGCTTGTGGTTCCTTCCTCTAAACAGATTACTGCATCAGCAACACAGAGGAAGACATTTTCAAACTTGTCTCAGTCTAAGCAAATTATTTCCTTGAATCCTCTACCTTTAAAGAAACACGGTTGTGACAGGAGCTCAATACATACTTGCTGTGAGGAGAACTTTCTGAAGGACGTGATGGAGTTTCTAATCCTTCGAGGACATAATCGACTTATTCCTCAAGGTGGGTTTGCTGAGTTTCCTGAGGCCATACTAAATGGGAAGCGTCTAGACCTGTACAATCTGTACAAGGAGGTGGTTACAAGAGGAGGCTTTCATGTAGGTAATGGTATCAACTGGAAAGGTCAAATCTTTTCAAAGATGCGCAATTACACCATGACAAACAGAATGACAGGTGTTGGAAATACGTTGAAAAGACATTACGAGACGTATCTTTTAGAGTATGAGTTGGCTCATGACGATGTAGATGGGGAGTGTTGCTTGTTATGTCACAGTAGTGCGGCAGGGGATTGGGTGAACTGTGGCATATGTGGTGAGTGGGCCCATTTTGGCTGCGATAGACGGCAGGGCCTCGGTGCCTTTAAGGACTATGCGAAAACGGATGGGCTAGAATACATATGCCCGCATTGTAGTGTCGCAAACTTCAAAAAGAAATCACAGAAAATTGTGAATGGGTACTCTCAAGGC 2349 42.61 MMFHPQGAARHTCSLLAVTCGNGLQEKYNRDVFEYQLQFPFPELVSSGRLEVKILTNPSKNEICKVIDSYLPNLLYLQGEQLENDEVGSLVLADVDLSSVEDIHDLFRTTLPTTVYLEIPNGDQLAEALHSKGIPYVIYWKNTFSRYTSCHFRNAFLSVVQSSSTHIWDAFQLGLASFRIYCLRSSHDRSDRRSEELEPHLLGEPSKINVEPPEVEVGEDEDGSPPTLPTINIHNDDVTTRFLICNESSTVDESLLGSLEDGLNALLNIEVSETRLSLYSPFNTHSVFSVSYSAPPPSLQAGTFSRGVVTMRCDLSTSSAAHISLLVSGSARTCFDDQLLENHIKNEIIENALLVRSILDCDGNKVPLSEPRKSESIACGATVFEVSMKVPSWALQVLRQLAPDVTYRSLVALGIASVQGLPVASFEKEDAERLLFFCSRHEKEIILDDLRFSSPPSWLKPPVPSRKRCQLINEKIIGLFDSPAYENILPTCKIKEENQDGSAMNGFKTCALPARQRFRVAALRPIPRSHRQKITPFSGITEANGQNGGQIKANMLVVPSSKQITASATQRKTFSNLSQSKQIISLNPLPLKKHGCDRSSIHTCCEENFLKDVMEFLILRGHNRLIPQGGFAEFPEAILNGKRLDLYNLYKEVVTRGGFHVGNGINWKGQIFSKMRNYTMTNRMTGVGNTLKRHYETYLLEYELAHDDVDGECCLLCHSSAAGDWVNCGICGEWAHFGCDRRQGLGAFKDYAKTDGLEYICPHCSVANFKKKSQKIVNGYSQG 783
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 27034219 27039112 - Bpe025384 Bpe03g00693 101198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe03g00693 783 MobiDBLite consensus disorder prediction 193 231 - -
Bpe03g00693 783 ProSiteProfiles ARID domain profile. 603 707 IPR001606 GO:0003677
Bpe03g00693 783 SMART ARID_2 600 703 - -
Bpe03g00693 783 Pfam ARID/BRIGHT DNA binding domain 606 703 IPR001606 GO:0003677
Bpe03g00693 783 CDD ARID 606 703 - -
Bpe03g00693 783 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 707 769 IPR013083 -
Bpe03g00693 783 CDD PHD_ARID4_like 713 764 - -
Bpe03g00693 783 Gene3D - 598 706 IPR036431 GO:0003677
Bpe03g00693 783 SUPERFAMILY FYVE/PHD zinc finger 706 771 IPR011011 -
Bpe03g00693 783 SUPERFAMILY ARID-like 606 718 IPR036431 GO:0003677
Bpe03g00693 783 PANTHER AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 4 2 780 IPR042293 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe03g00693 Bpe10g00717 CCT
Bpe03g00693 Bpe10g00717 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe10g00717 Bpe-Chr10:13562254 Bpe03g00693 Bpe-Chr3:27034219 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
21113 PF01388 ARID 5.70E-14 CL0123 Bpe TR
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe03g00693 - - zju:107435388 1100.12