Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe03g00695 ATGACCGACGTCGAGTATTTGACCGCCGGAGTCCAAGATTCCGGCCACAAACCGCCCATCCTCAAGAGAAACAAGAAGAAACTCTTGTTCTGGGCTCTCTCTGCTATTCTACTTCTTTCCGTTGTCATCGGAATTGCAGTCGGAGTACAGTCGAGAAAGAAGCCCGACGAGATTGAGACTTCTCTTTCCCATTCTATAATTAAAACCTCTTGCAGCTCCACCCTGTACCCCGAGTTATGCTTCTCCACCCTGACTTCAGTAGACAGAGTCAGCAAAAAGGTCTCCGGCCAGAAAGATGTCATCGAACTGGCGTTAAATATCACGACGGAAGTAGTGAAACAGAATTATTTAGCCATTAAAAAGCTTACGACTCGAAAAGGCCTGACCAAGCGCGAGAAGTGTGCTCTGAATGATTGCCTGGACAACATGGACGACACCATCTACGAGCTTCACAAGGCTGTAGAGGATCTCCATTTGTACCCAACCAAGAAATCTCTGTTCCAGCACGCCGACGACCTTAAAACTTTGCTCAGCTCAACAATCACGAACCAGGAGTCTTGCCTGGACGGGTTCTCTCACGGCGATGCTGACAGAAAGGTGCGGAAGGTGCTGCTAAAGTCGGAGACTCATATCGAGAAAATGTGCAGCAATGTCTTGGCGATGATTAAGAACATGACAGACACTGACATAATCAAAGAGAGTAAAATGATGGGGAGGAAGAATCTGATGGAGGACGTCGGTCACAACGACATAAAGTGGCCGGAATGGCTTTCGGCTGCCGACCGGCGCCTTTTGCAGTCGTCCTCAGTAACACCCAACGTAGTGGTGGCAGCCGACGGCAGCGGGAACTACCGGACAGTCTCGGCTGCAGTGGCAGCCGCTCCGTCGCAGCGCACTACCAGATATATCATCAGAATCAAAGCCGGAGTTTACAGAGAAAACGTAGACGTGCCCAGAAGTAAAACCAACATCATGTTTTTGGGGGATGGAAGAACAAGCACCATCATCACCGGAAACAGGAATGTAGTCGACGGAAGCACAACTTTCAACTCCGCAACCGTCGCGGTTGTTGGGGAAAGATTTATAGCAAGAGATATTACCTTCCAAAACACGGCCGGCCCATCAAAGCACCAGGCGGTGGCGCTTCGCGTCGGGTCCGATCTCTCTGCGTTTTACCGATGTGACATGATAGCCTATCAAGACACCCTCTACGTCCACTCCAACCGTCAATTCTTCACAGAATGCTTCATCGCCGGCACCGTAGATTTCATCTTCGGCAACGGCGCCGCCGTCTTGCAAAACTGCGACATCCATGCGCGTCGACCGAACTCCGGCCAAAAGAACATGGTCACCGCCCAAGGCCGGACCGACCCGAACCAAAACACTGGCATTGTAATCCAGAAATGTAGAATCGCCGCCACCTCCGACCTCAGGCCTGTTCAGAGCAGTTTCCCAACTTACCTGGGACGACCATGGAAGGAATACTCAAGGACGGTGGTTCTGCAGACGTCGATAAGCAACGTCATAAACCCAGCCGGATGGCACATCTGGGACGGGACATTCGCACTTAACACCCTGTTTTACGGCGAATACTTAAACACGGGGGCCGGGGCTGACACGTCGAAGCGGGTAAGTTGGAAAGGGTTCAAGGTGATCACCAGTGCAAGTGAAGCTCAGGCCTTCACTCCTGGAAGGTTCATCGCCGGCGGTAGTTGGTTGAGTGGCACTGGTTTTCCATTCTCTCTGGGTCTGTAG 1755 51.62 MTDVEYLTAGVQDSGHKPPILKRNKKKLLFWALSAILLLSVVIGIAVGVQSRKKPDEIETSLSHSIIKTSCSSTLYPELCFSTLTSVDRVSKKVSGQKDVIELALNITTEVVKQNYLAIKKLTTRKGLTKREKCALNDCLDNMDDTIYELHKAVEDLHLYPTKKSLFQHADDLKTLLSSTITNQESCLDGFSHGDADRKVRKVLLKSETHIEKMCSNVLAMIKNMTDTDIIKESKMMGRKNLMEDVGHNDIKWPEWLSAADRRLLQSSSVTPNVVVAADGSGNYRTVSAAVAAAPSQRTTRYIIRIKAGVYRENVDVPRSKTNIMFLGDGRTSTIITGNRNVVDGSTTFNSATVAVVGERFIARDITFQNTAGPSKHQAVALRVGSDLSAFYRCDMIAYQDTLYVHSNRQFFTECFIAGTVDFIFGNGAAVLQNCDIHARRPNSGQKNMVTAQGRTDPNQNTGIVIQKCRIAATSDLRPVQSSFPTYLGRPWKEYSRTVVLQTSISNVINPAGWHIWDGTFALNTLFYGEYLNTGAGADTSKRVSWKGFKVITSASEAQAFTPGRFIAGGSWLSGTGFPFSLGL 584
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 27078457 27080809 - Bpe012607.2 Bpe03g00695 101200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe03g00695 584 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 65 226 IPR035513 -
Bpe03g00695 584 SMART PMEI_2 62 221 IPR006501 GO:0004857
Bpe03g00695 584 TIGRFAM PME_inhib: pectinesterase inhibitor domain 35 225 IPR006501 GO:0004857
Bpe03g00695 584 Pfam Pectinesterase 273 569 IPR000070 GO:0030599|GO:0042545
Bpe03g00695 584 PANTHER PECTINESTERASE 32 583 - -
Bpe03g00695 584 ProSitePatterns Pectinesterase signature 2. 417 426 IPR033131 -
Bpe03g00695 584 Gene3D Invertase/pectin methylesterase inhibitor family protein 61 226 IPR035513 -
Bpe03g00695 584 SUPERFAMILY Pectin lyase-like 270 583 IPR011050 -
Bpe03g00695 584 CDD PMEI-like_3 69 226 - -
Bpe03g00695 584 Pfam Plant invertase/pectin methylesterase inhibitor 66 221 IPR006501 GO:0004857
Bpe03g00695 584 PANTHER PECTINESTERASE 32 583 - -
Bpe03g00695 584 Gene3D - 267 584 IPR012334 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe03g00695 Bpe09g00049 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe03g00188 Bpe-Chr3:2281330 Bpe03g00695 Bpe-Chr3:27078457 5.11E-149 dispersed
Bpe03g00235 Bpe-Chr3:3128996 Bpe03g00695 Bpe-Chr3:27078457 3.40E-153 dispersed
Bpe03g00695 Bpe-Chr3:27078457 Bpe14g00892 Bpe-Chr14:6662463 2.12E-147 dispersed
Bpe14g00893 Bpe-Chr14:6669474 Bpe03g00695 Bpe-Chr3:27078457 4.80E-126 dispersed
Bpe10g00981 Bpe-Chr10:15252538 Bpe03g00695 Bpe-Chr3:27078457 3.76E-153 transposed
Bpe15g00659 Bpe-Chr15:17311899 Bpe03g00695 Bpe-Chr3:27078457 7.36E-37 transposed
Bpe02g02161 Bpe-Chr2:22894363 Bpe03g00695 Bpe-Chr3:27078457 2.72E-115 wgd
Bpe03g00695 Bpe-Chr3:27078457 Bpe09g00049 Bpe-Chr9:328544 3.86E-116 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe03g00695 K01051 - jre:109004988 836.639