Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe03g00708 ATGGGCGCAGGTAACGAGAAACTCTGTGGGATGCCTCTAGAGAAAGTCTGTGGCTCCTCTCTGAACACACGACCAAAAGCAATTCCTCTGCTGAGAATCGCCATAGCCATCATGGTTGTAGGGCTCATACTGGCACTTATGGCTGCAATATTCACAATATACCACTTAGTAAACAGAAGAAGACGGTCAGAACGAGGCCAGGAAGCAAGGGGACGGCTGTCCAAAGTGCACAACGTGTTTGGGATCTTCCATGAAAACCAAATGGAACAAGCAGAGCAATCGAAGAAGCCGGAGAACGGAAAGCTTACATTCGTGATGGACGACCGCGAGAGATTTGATCTGCACGATCTGCTCCGGGCGTCTGCAGAAGTTTTGGGGAGTGGAACGTTTGGATCGTCTTACAAAGCCACCATATTGTGCGATGCTGTGGCGGTGAAGAGGTATAAACAGATACTGAACAGCGTCGGAAGGGAGGAGTTTTACGAGCACATGAGGAGGCTGGGAAGACTGCGGCATCCGAACTTGCTTCCTATAGTTGCCTACCATTATAGAAAAGAAGAGAAGCTCTTGATTTCTGACTTCGTGGACAACGGTAGTCTGGCCAGTCATATTCACGGAAAGCGGAATGAAGCGCAACCAGGCCTGGATTGGGTAACCCGGCTGAGGATAATCAAAGGCATAGCCAGGGGATTATCGTACCTCTACAGCAGCGCGCCGCCGAGCATAACAGTAGCGCACGGCCATCTGAAATCATCCAACGTGCTGCTAGACGACGCAATGGAACCTCTATTGACAGACTACGGTCTCCTTCCCATTGTGAACAATGAACAGTCCTATCACCTCATGATGGCCTACAAATCGCCGGAGTTCGCCCGACAGGGCCGTATAACCAGAAAAACCGACGTGTGGTGTCTGGGAGTAGTGATACTGGAGGTATTAACGGGAAAATTTCCGGAGAACTATTTGACGGAGAGGCACGAAAGGGGGTCAGATATAGGGGAATGGGTGAATGAAATGATAAAAGAGAAGCGTACGAGCCAGGTTTGGGACTCGGAGATGAGGGCAGTCAGCCGAGGAGAATTGCTGAAGCTGTTGAAGATCGGGCTGGGGTGCTGCGAGGAGGAAGAGGAGAGGAGAATGGATTTGAACGAGGTTGTGGCTCAAATCGAAGAGCTGGAGGAGGGAGAGACGTGGGTGGGTAGCAGCCCGATGACGACTGAAGATGAACGAAATCCTTCGTTTTCTTCTTTAGAAATGGGCTCCGCCGTCGGTAAAGCTGGAAACGCCGTAGGAACCTGCCATTGA 1305 50.88 MGAGNEKLCGMPLEKVCGSSLNTRPKAIPLLRIAIAIMVVGLILALMAAIFTIYHLVNRRRRSERGQEARGRLSKVHNVFGIFHENQMEQAEQSKKPENGKLTFVMDDRERFDLHDLLRASAEVLGSGTFGSSYKATILCDAVAVKRYKQILNSVGREEFYEHMRRLGRLRHPNLLPIVAYHYRKEEKLLISDFVDNGSLASHIHGKRNEAQPGLDWVTRLRIIKGIARGLSYLYSSAPPSITVAHGHLKSSNVLLDDAMEPLLTDYGLLPIVNNEQSYHLMMAYKSPEFARQGRITRKTDVWCLGVVILEVLTGKFPENYLTERHERGSDIGEWVNEMIKEKRTSQVWDSEMRAVSRGELLKLLKIGLGCCEEEEERRMDLNEVVAQIEELEEGETWVGSSPMTTEDERNPSFSSLEMGSAVGKAGNAVGTCH 434
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 27231889 27233312 - Bpe012618.1 Bpe03g00708 101213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe03g00708 434 Gene3D Transferase(Phosphotransferase) domain 1 195 400 - -
Bpe03g00708 434 MobiDBLite consensus disorder prediction 399 418 - -
Bpe03g00708 434 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 3 403 - -
Bpe03g00708 434 PANTHER POLLEN RECEPTOR-LIKE KINASE 5 3 403 - -
Bpe03g00708 434 Gene3D Phosphorylase Kinase; domain 1 84 194 - -
Bpe03g00708 434 ProSiteProfiles Protein kinase domain profile. 119 399 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe03g00708 434 Coils Coil 372 392 - -
Bpe03g00708 434 MobiDBLite consensus disorder prediction 395 419 - -
Bpe03g00708 434 Pfam Protein kinase domain 122 387 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe03g00708 434 SUPERFAMILY Protein kinase-like (PK-like) 123 392 IPR011009 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe03g00708 Bpe-Chr3:27231889 Bpe14g00541 Bpe-Chr14:4701524 7.94E-124 dispersed
Bpe03g00708 Bpe-Chr3:27231889 Bpe09g00065 Bpe-Chr9:451682 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63245 PF00069 Pkinase 1.40E-29 CL0016 Bpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe03g00708 - - cmo:103487533 450.669